CAZyme Information: MGYG000000138_02801

Basic Information

• Species: Parabacteroides johnsonii
• Lineage: Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Tannerellaceae; Parabacteroides; Parabacteroides johnsonii
• CAZyme ID: MGYG000000138_02801
• CAZy Family: PL35
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
619		70341.57	9.1413

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000000138	4917599	Isolate	United Kingdom	Europe

• Gene Location: Start: 194624; End: 196483 Strand: +

Full Sequence      

MKARILVWLVVLFCCHNASFAQKEFVNASARLSGHPRILLQKGEEKALKKVIMKDAVWKD
IHQSLVDEAGEIVKLPLNERIKTGRRLLSVSRENLRRIFILSYAYRMTGKSEFLKRAESE
MLKAASFSDWNPSHFLDVGEMTMALAIGYDWLYPQLSVQTKKEIENAIVEKGLRPSFDER
YNWFVNAVHNWSQVCHAGVTYGALAIWEKEPELSRTVINRAIDKISIPMGHYAPDGAYPE
GIGYWDYGTSFNAMFLSAIEKAFGTDYGLSELPGFLKTGEYILHAVTPNLKNFAYSDNGG
TAFLAPTMFWFYDKTKDASILYNQVQLYKKDGQKRIKKNRLAPAMLIWGASASLANPQKP
ARLSWMAQGDNPVCFMRSSWNDSSAVYVGMKMGSPSVNHGHMDVGSFLLEADGVLWGMDM
GGEEYNRLETRGVDLWNSRQNSQRWDVYRYNNFAHNTLSFNHKYQDVKGKAQIDGYSDQE
NNMYVISDLTPVYKDQVKSAKRAVSLVNKEYVVVEDLIEATKRFTMMTWTMVTPASAKIV
ADNVMLLEKDGKRLYIKVEGPKKVRWHISPAQSEFSYDSPNPGISIIGFDTDLELSVKQS
IRVFLLPGENKNVTYKSVF

Enzyme Prediction     

No EC number prediction in MGYG000000138_02801.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
PL35	384	562	1.7e-66	0.9832402234636871

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
pfam16332	DUF4962	3.54e-04	30	212	131	331	Domain of unknown function (DUF4962). This family consists of uncharacterized proteins around 870 residues in length and is mainly found in various Bacteroides species. The function of this protein is unknown.
pfam07940	Hepar_II_III	0.002	399	586	39	232	Heparinase II/III-like protein. This family features sequences that are similar to a region of the Flavobacterium heparinum proteins heparinase II and heparinase III. The former is known to degrade heparin and heparin sulphate, whereas the latter predominantly degrades heparin sulphate. Both are secreted into the periplasmic space upon induction with heparin.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
QUT50613.1	0.0	1	618	1	618
QGA22620.1	5.32e-250	1	618	1	617
BCG53903.1	4.90e-241	30	607	26	603
QIP14356.1	2.34e-216	6	607	8	609
QGY42587.1	4.90e-215	1	609	1	600

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
3A0O_A	1.26e-07	29	298	133	417	Crystalstructure of alginate lyase from Agrobacterium tumefaciens C58 [Agrobacterium fabrum str. C58],3A0O_B Crystal structure of alginate lyase from Agrobacterium tumefaciens C58 [Agrobacterium fabrum str. C58]
3AFL_A	1.26e-07	29	298	133	417	Crystalstructure of exotype alginate lyase Atu3025 H531A complexed with alginate trisaccharide [Agrobacterium fabrum str. C58]

Swiss-Prot Hits     

has no Swissprot hit.

SignalP and Lipop Annotations

This protein is predicted as SP

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.000195	0.999208	0.000179	0.000147	0.000130	0.000123

TMHMM  Annotations     

There is no transmembrane helices in MGYG000000138_02801.