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CAZyme Information: MGYG000000138_03807

You are here: Home > Sequence: MGYG000000138_03807

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Parabacteroides johnsonii
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Tannerellaceae; Parabacteroides; Parabacteroides johnsonii
CAZyme ID MGYG000000138_03807
CAZy Family GH35
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
779 88666.05 5.618
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000138 4917599 Isolate United Kingdom Europe
Gene Location Start: 57093;  End: 59432  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000000138_03807.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH35 39 350 1.4e-118 0.990228013029316

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam01301 Glyco_hydro_35 1.48e-165 38 351 1 316
Glycosyl hydrolases family 35.
PLN03059 PLN03059 1.38e-54 6 643 6 753
beta-galactosidase; Provisional
COG1874 GanA 7.87e-38 37 606 6 600
Beta-galactosidase GanA [Carbohydrate transport and metabolism].
pfam00754 F5_F8_type_C 8.52e-07 698 774 1 72
F5/8 type C domain. This domain is also known as the discoidin (DS) domain family.
cd00057 FA58C 1.18e-04 683 769 1 79
Substituted updates: Jan 31, 2002

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QUT50204.1 0.0 11 777 12 778
QRO23434.1 0.0 4 778 5 781
QIU94062.1 0.0 4 779 1 778
BCA48215.1 0.0 4 779 1 778
ALJ48378.1 0.0 4 779 1 778

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
6EON_A 0.0 14 778 10 778
GalactanaseBT0290 [Bacteroides thetaiotaomicron VPI-5482]
3D3A_A 5.84e-312 29 628 5 605
Crystalstructure of a beta-galactosidase from Bacteroides thetaiotaomicron [Bacteroides thetaiotaomicron VPI-5482]
4MAD_A 7.13e-142 23 612 11 593
ChainA, Beta-galactosidase [Niallia circulans],4MAD_B Chain B, Beta-galactosidase [Niallia circulans]
7KDV_A 2.14e-120 29 612 13 629
ChainA, Beta-galactosidase [Mus musculus],7KDV_C Chain C, Beta-galactosidase [Mus musculus],7KDV_E Chain E, Beta-galactosidase [Mus musculus],7KDV_G Chain G, Beta-galactosidase [Mus musculus],7KDV_I Chain I, Beta-galactosidase [Mus musculus],7KDV_K Chain K, Beta-galactosidase [Mus musculus]
4E8C_A 1.67e-119 39 618 10 593
Crystalstructure of streptococcal beta-galactosidase in complex with galactose [Streptococcus pneumoniae TIGR4],4E8C_B Crystal structure of streptococcal beta-galactosidase in complex with galactose [Streptococcus pneumoniae TIGR4],4E8D_A Crystal structure of streptococcal beta-galactosidase [Streptococcus pneumoniae TIGR4],4E8D_B Crystal structure of streptococcal beta-galactosidase [Streptococcus pneumoniae TIGR4]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
P48982 2.26e-139 4 579 2 573
Beta-galactosidase OS=Xanthomonas manihotis OX=43353 GN=bga PE=1 SV=1
Q9TRY9 4.93e-123 9 612 10 645
Beta-galactosidase OS=Canis lupus familiaris OX=9615 GN=GLB1 PE=1 SV=3
Q60HF6 2.54e-119 11 612 13 644
Beta-galactosidase OS=Macaca fascicularis OX=9541 GN=GLB1 PE=2 SV=1
P16278 1.70e-118 11 612 13 644
Beta-galactosidase OS=Homo sapiens OX=9606 GN=GLB1 PE=1 SV=2
P23780 1.12e-117 7 612 8 646
Beta-galactosidase OS=Mus musculus OX=10090 GN=Glb1 PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as LIPO

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000000 0.000000 1.000049 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000000138_03807.