CAZyme Information: MGYG000000138_03934

Basic Information

• Species: Parabacteroides johnsonii
• Lineage: Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Tannerellaceae; Parabacteroides; Parabacteroides johnsonii
• CAZyme ID: MGYG000000138_03934
• CAZy Family: GH141
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
698	MGYG000000138_19|CGC1	79930.72	6.678

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000000138	4917599	Isolate	United Kingdom	Europe

• Gene Location: Start: 14718; End: 16814 Strand: -

Full Sequence      

MKFFFCFFVVFFSFMENLVAEERLFLSPQGHDSNIGSKDKPLATLEGVRERIRKIRKKRI
FTDTLFVEIQSGTYYITHEFQLTDEDSGLPTAPIVFRGNEKNRPIILGGRKTTRFEYVTN
ELWRVFIPEVADFGLYFEQLYINGERRFRAQMPNRGEFMFPKRVEEIVLDSLRGKPVFAS
QKLIVKAENFSVLNTLEQSDLNDVLIVANHKWDNSRKRIQYITPLDSSIFLGGSVMPFWN
VIDGQSRYVIENCRNALDQSGEWFLQRDGYLYYIPLPEETIENTECMYPVSEKLLCITGS
EGKQVSSIRFENICFEGAAYQTPSSGNDPSQAAAVVDAAIMLDNTRNIEFVNCDIAHVGQ
HAIWFRKNCSYCRLEHCHLHDLGGGGVKIGDYSLSQIDQNGFAATHHITIHNNIIQHGGY
VFPNAAGVIIFHGSDNEITHNDIADFRYTGVSAGWVWGYASSPSKRNKIEFNHIHHLGWG
ELCDMGGVYTLGASEGTTVSNNVIHDIYSFFYGGWGLYTDEGSYGIRMENNLVYCCKNAG
FHQHYGKENVIRNNIFALNKLSQLQLTKVESHLSFSFVNNIVYFEEGLLYMDMIKGAWMN
AQTVIDHNCFWNVRTKNPDFLGYSFSEWKKLGKDKHSVVADPIFVNPQEFDFRFRNMNVV
KKIGFKPFDYTRAGVYGDPVWKAKAKLPDCLIKQFAEL

Enzyme Prediction     

No EC number prediction in MGYG000000138_03934.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH141	23	533	4.7e-98	0.9886148007590133

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
pfam13229	Beta_helix	3.32e-14	338	531	1	156	Right handed beta helix region. This region contains a parallel beta helix region that shares some similarity with Pectate lyases.
pfam13229	Beta_helix	2.15e-10	426	583	1	135	Right handed beta helix region. This region contains a parallel beta helix region that shares some similarity with Pectate lyases.
pfam05048	NosD	8.14e-06	410	589	1	157	Periplasmic copper-binding protein (NosD). NosD is a periplasmic protein which is thought to insert copper into the exported reductase apoenzyme (NosZ). This region forms a parallel beta helix domain.
pfam13229	Beta_helix	0.008	337	413	92	156	Right handed beta helix region. This region contains a parallel beta helix region that shares some similarity with Pectate lyases.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
QGA25764.1	2.95e-303	8	687	11	674
SCM58138.1	3.79e-267	13	698	12	700
QEC52583.1	1.19e-220	19	685	22	705
AKP49975.1	6.44e-212	24	695	38	703
AWO00314.1	9.38e-210	24	695	37	693

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
5MQP_A	1.31e-40	15	531	18	580	Glycosidehydrolase BT_1002 [Bacteroides thetaiotaomicron],5MQP_B Glycoside hydrolase BT_1002 [Bacteroides thetaiotaomicron],5MQP_C Glycoside hydrolase BT_1002 [Bacteroides thetaiotaomicron],5MQP_D Glycoside hydrolase BT_1002 [Bacteroides thetaiotaomicron],5MQP_E Glycoside hydrolase BT_1002 [Bacteroides thetaiotaomicron],5MQP_F Glycoside hydrolase BT_1002 [Bacteroides thetaiotaomicron],5MQP_G Glycoside hydrolase BT_1002 [Bacteroides thetaiotaomicron],5MQP_H Glycoside hydrolase BT_1002 [Bacteroides thetaiotaomicron]

Swiss-Prot Hits     

has no Swissprot hit.

SignalP and Lipop Annotations

This protein is predicted as SP

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.002731	0.996350	0.000280	0.000201	0.000204	0.000210

TMHMM  Annotations     

There is no transmembrane helices in MGYG000000138_03934.