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CAZyme Information: MGYG000000140_00088
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | UMGS1375 sp900066615 | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; UMGS1375; UMGS1375 sp900066615 | |||||||||||
| CAZyme ID | MGYG000000140_00088 | |||||||||||
| CAZy Family | GH110 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 100223; End: 105514 Strand: + | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH110 | 39 | 621 | 1.2e-166 | 0.9835766423357665 |
| CBM51 | 1276 | 1414 | 5.8e-38 | 0.9925373134328358 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| pfam08305 | NPCBM | 1.67e-44 | 1275 | 1415 | 2 | 136 | NPCBM/NEW2 domain. This novel putative carbohydrate binding module (NPCBM) domain is found at the N-terminus of glycosyl hydrolase family 98 proteins. This domain has also been called the NEW2 domain (Naumoff DG. Phylogenetic analysis of alpha-galactosidases of the GH27 family. Molecular Biology (Engl Transl). (2004)38:388-399.) |
| smart00776 | NPCBM | 2.96e-28 | 1275 | 1414 | 4 | 144 | This novel putative carbohydrate binding module (NPCBM) domain is found at the N-terminus of glycosyl hydrolase family 98 proteins. |
| COG5492 | YjdB | 1.08e-18 | 1364 | 1509 | 133 | 261 | Uncharacterized conserved protein YjdB, contains Ig-like domain [General function prediction only]. |
| pfam02368 | Big_2 | 1.04e-14 | 1430 | 1507 | 1 | 77 | Bacterial Ig-like domain (group 2). This family consists of bacterial domains with an Ig-like fold. Members of this family are found in bacterial and phage surface proteins such as intimins. |
| pfam13306 | LRR_5 | 3.62e-09 | 1684 | 1732 | 10 | 57 | Leucine rich repeats (6 copies). This family includes a number of leucine rich repeats. This family contains a large number of BSPA-like surface antigens from Trichomonas vaginalis. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| BBA55548.1 | 1.83e-180 | 28 | 748 | 13 | 728 |
| BAQ98494.1 | 6.74e-179 | 28 | 748 | 13 | 728 |
| AFL04872.1 | 6.74e-179 | 28 | 748 | 13 | 728 |
| QRI58269.1 | 7.60e-179 | 28 | 748 | 18 | 733 |
| VEG17902.1 | 1.17e-178 | 28 | 748 | 36 | 751 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 7JW4_A | 1.31e-37 | 23 | 627 | 11 | 593 | Crystalstructure of PdGH110B in complex with D-galactose [Pseudoalteromonas distincta],7JW4_B Crystal structure of PdGH110B in complex with D-galactose [Pseudoalteromonas distincta] |
| 7JWF_A | 5.59e-37 | 23 | 627 | 11 | 593 | Crystalstructure of PdGH110B D344N in complex with alpha-(1,3)-galactobiose [Pseudoalteromonas distincta],7JWF_B Crystal structure of PdGH110B D344N in complex with alpha-(1,3)-galactobiose [Pseudoalteromonas distincta],7JWF_C Crystal structure of PdGH110B D344N in complex with alpha-(1,3)-galactobiose [Pseudoalteromonas distincta],7JWF_D Crystal structure of PdGH110B D344N in complex with alpha-(1,3)-galactobiose [Pseudoalteromonas distincta] |
| 2VMH_A | 1.06e-20 | 1273 | 1413 | 6 | 149 | Thestructure of CBM51 from Clostridium perfringens GH95 [Clostridium perfringens] |
| 2VMG_A | 1.25e-20 | 1273 | 1413 | 12 | 155 | Thestructure of CBM51 from Clostridium perfringens GH95 in complex with methyl-galactose [Clostridium perfringens] |
| 2VMI_A | 1.97e-20 | 1273 | 1413 | 6 | 149 | Thestructure of seleno-methionine labelled CBM51 from Clostridium perfringens GH95 [Clostridium perfringens] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| B1V8K7 | 3.96e-157 | 25 | 734 | 19 | 719 | Alpha-1,3-galactosidase A OS=Streptacidiphilus griseoplanus OX=66896 GN=glaA PE=1 SV=1 |
| Q826C5 | 5.05e-130 | 25 | 660 | 24 | 622 | Alpha-1,3-galactosidase A OS=Streptomyces avermitilis (strain ATCC 31267 / DSM 46492 / JCM 5070 / NBRC 14893 / NCIMB 12804 / NRRL 8165 / MA-4680) OX=227882 GN=glaA PE=3 SV=1 |
| Q64MU6 | 1.16e-82 | 30 | 671 | 17 | 601 | Alpha-1,3-galactosidase A OS=Bacteroides fragilis (strain YCH46) OX=295405 GN=glaA PE=3 SV=1 |
| Q5L7M8 | 7.21e-82 | 30 | 671 | 17 | 601 | Alpha-1,3-galactosidase A OS=Bacteroides fragilis (strain ATCC 25285 / DSM 2151 / CCUG 4856 / JCM 11019 / NCTC 9343 / Onslow) OX=272559 GN=glaA PE=3 SV=1 |
| Q8A2Z5 | 9.15e-80 | 57 | 610 | 29 | 540 | Alpha-1,3-galactosidase A OS=Bacteroides thetaiotaomicron (strain ATCC 29148 / DSM 2079 / JCM 5827 / CCUG 10774 / NCTC 10582 / VPI-5482 / E50) OX=226186 GN=glaA PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.000567 | 0.998253 | 0.000588 | 0.000213 | 0.000182 | 0.000165 |
