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CAZyme Information: MGYG000000143_02617

You are here: Home > Sequence: MGYG000000143_02617

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Turicibacter sanguinis
Lineage Bacteria; Firmicutes; Bacilli; Haloplasmatales_A; Turicibacteraceae; Turicibacter; Turicibacter sanguinis
CAZyme ID MGYG000000143_02617
CAZy Family CBM51
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
2289 256134 4.2986
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000143 2958073 Isolate United Kingdom Europe
Gene Location Start: 16173;  End: 23042  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000000143_02617.

CAZyme Signature Domains help

Family Start End Evalue family coverage
CBM51 1829 1968 2.8e-41 0.9850746268656716
CBM51 1311 1442 3.9e-29 0.9701492537313433

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam08305 NPCBM 8.32e-49 1829 1969 4 136
NPCBM/NEW2 domain. This novel putative carbohydrate binding module (NPCBM) domain is found at the N-terminus of glycosyl hydrolase family 98 proteins. This domain has also been called the NEW2 domain (Naumoff DG. Phylogenetic analysis of alpha-galactosidases of the GH27 family. Molecular Biology (Engl Transl). (2004)38:388-399.)
smart00776 NPCBM 1.02e-41 1829 1969 6 145
This novel putative carbohydrate binding module (NPCBM) domain is found at the N-terminus of glycosyl hydrolase family 98 proteins.
pfam08305 NPCBM 1.51e-35 1308 1445 1 136
NPCBM/NEW2 domain. This novel putative carbohydrate binding module (NPCBM) domain is found at the N-terminus of glycosyl hydrolase family 98 proteins. This domain has also been called the NEW2 domain (Naumoff DG. Phylogenetic analysis of alpha-galactosidases of the GH27 family. Molecular Biology (Engl Transl). (2004)38:388-399.)
smart00776 NPCBM 8.96e-28 1311 1445 6 145
This novel putative carbohydrate binding module (NPCBM) domain is found at the N-terminus of glycosyl hydrolase family 98 proteins.
pfam00754 F5_F8_type_C 6.13e-15 301 426 1 123
F5/8 type C domain. This domain is also known as the discoidin (DS) domain family.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QJS19250.1 0.0 1 2289 1 2289
AQM59432.1 0.0 1 2288 1 2443
AQW26342.1 0.0 1 2264 1 2117
AMN32462.1 0.0 1 2264 1 2117
AOY53509.1 0.0 1 2264 1 2117

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
7JFS_A 1.78e-168 275 1228 27 980
ChainA, F5/8 type C domain protein [Clostridium perfringens ATCC 13124]
7JS4_A 6.00e-120 723 1523 28 831
ChainA, F5/8 type C domain protein [Clostridium perfringens ATCC 13124]
7JND_A 8.66e-106 27 453 19 449
ChainA, F5/8 type C domain protein [Clostridium perfringens ATCC 13124],7JNF_A Chain A, F5/8 type C domain protein [Clostridium perfringens ATCC 13124]
7JNB_A 7.46e-105 26 453 23 449
ChainA, F5/8 type C domain protein [Clostridium perfringens ATCC 13124]
5KDJ_A 4.94e-88 655 1307 24 672
ZmpBmetallopeptidase from Clostridium perfringens [Clostridium perfringens ATCC 13124],5KDJ_B ZmpB metallopeptidase from Clostridium perfringens [Clostridium perfringens ATCC 13124]

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000446 0.998710 0.000266 0.000212 0.000172 0.000149

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000000143_02617.