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CAZyme Information: MGYG000000147_01963

You are here: Home > Sequence: MGYG000000147_01963

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Bacillus paralicheniformis
Lineage Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus paralicheniformis
CAZyme ID MGYG000000147_01963
CAZy Family PL1
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
494 MGYG000000147_3|CGC3 54829.52 9.6107
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000147 4371304 Isolate United Kingdom Europe
Gene Location Start: 177863;  End: 179347  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000000147_01963.

CAZyme Signature Domains help

Family Start End Evalue family coverage
PL1 223 417 2.5e-95 0.9948717948717949

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG3866 PelB 5.12e-71 162 478 17 341
Pectate lyase [Carbohydrate transport and metabolism].
smart00656 Amb_all 1.29e-39 228 417 3 187
Amb_all domain.
pfam00544 Pec_lyase_C 1.87e-36 211 416 8 211
Pectate lyase. This enzyme forms a right handed beta helix structure. Pectate lyase is an enzyme involved in the maceration and soft rotting of plant tissue.
pfam14200 RicinB_lectin_2 0.006 73 169 4 89
Ricin-type beta-trefoil lectin domain-like.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
BCE07889.1 0.0 1 494 1 494
BCE15879.1 0.0 1 494 1 494
BCE09706.1 0.0 1 494 1 494
BAL45990.1 0.0 1 494 1 494
AJO19478.1 0.0 1 494 1 494

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
3ZSC_A 1.05e-12 181 393 8 212
Catalyticfunction and substrate recognition of the pectate lyase from Thermotoga maritima [Thermotoga maritima]
5AMV_A 1.93e-10 232 393 118 294
Structuralinsights into the loss of catalytic competence in pectate lyase at low pH [Bacillus subtilis],5X2I_A Polygalacturonate Lyase by Fusing with a Self-assembling Amphipathic Peptide [Bacillus subtilis subsp. subtilis str. 168]
1BN8_A 2.08e-10 232 393 139 315
BacillusSubtilis Pectate Lyase [Bacillus subtilis]
3KRG_A 4.53e-10 232 393 118 294
ChainA, Pectate lyase [Bacillus subtilis]
2BSP_A 4.86e-10 232 393 139 315
ChainA, PROTEIN (PECTATE LYASE) [Bacillus subtilis]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
O34819 5.84e-127 164 483 24 341
Pectin lyase OS=Bacillus subtilis (strain 168) OX=224308 GN=pelB PE=3 SV=1
P94449 6.66e-126 164 483 24 341
Pectin lyase OS=Bacillus subtilis OX=1423 GN=pelB PE=1 SV=1
P27027 2.06e-102 175 487 10 312
Pectin lyase OS=Pseudomonas marginalis OX=298 GN=pnl PE=1 SV=2
P24112 2.28e-93 172 483 4 310
Pectin lyase OS=Pectobacterium carotovorum OX=554 GN=pnl PE=1 SV=1
Q00645 7.64e-19 190 393 43 234
Pectate lyase plyB OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=plyB PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.010921 0.987893 0.000407 0.000269 0.000231 0.000243

TMHMM  Annotations      download full data without filtering help

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