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CAZyme Information: MGYG000000155_00245

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Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Weissella confusa
Lineage Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Weissella; Weissella confusa
CAZyme ID MGYG000000155_00245
CAZy Family CBM50
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
439 MGYG000000155_1|CGC5 44162.02 3.8786
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000155 2346100 Isolate China Asia
Gene Location Start: 238696;  End: 240015  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000000155_00245.

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam00877 NLPC_P60 7.44e-29 330 430 3 96
NlpC/P60 family. The function of this domain is unknown. It is found in several lipoproteins.
PRK13914 PRK13914 1.16e-25 104 425 148 466
invasion associated endopeptidase.
COG0791 Spr 2.19e-19 245 422 1 179
Cell wall-associated hydrolase, NlpC family [Cell wall/membrane/envelope biogenesis].
cd00118 LysM 3.90e-13 154 198 1 45
Lysin Motif is a small domain involved in binding peptidoglycan. LysM, a small globular domain with approximately 40 amino acids, is a widespread protein module involved in binding peptidoglycan in bacteria and chitin in eukaryotes. The domain was originally identified in enzymes that degrade bacterial cell walls, but proteins involved in many other biological functions also contain this domain. It has been reported that the LysM domain functions as a signal for specific plant-bacteria recognition in bacterial pathogenesis. Many of these enzymes are modular and are composed of catalytic units linked to one or several repeats of LysM domains. LysM domains are found in bacteria and eukaryotes.
smart00257 LysM 1.14e-12 155 198 1 44
Lysin motif.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QIE78434.1 5.03e-243 1 439 1 439
QBZ02383.1 4.31e-239 1 439 1 447
QYU57199.1 2.50e-236 1 439 1 439
QBZ04357.1 8.47e-189 1 438 1 444
QMU89441.1 1.16e-107 1 438 1 481

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
6B8C_A 6.62e-23 316 436 30 141
Crystalstructure of NlpC/p60 domain of peptidoglycan hydrolase SagA [Enterococcus faecium]
3PBC_A 4.68e-13 329 437 98 211
ChainA, Invasion Protein [Mycobacterium tuberculosis]
3NE0_A 4.68e-13 329 437 98 211
Structureand functional regulation of RipA, a mycobacterial enzyme essential for daughter cell separation [Mycobacterium tuberculosis H37Rv]
4Q4T_A 8.43e-13 329 437 356 469
Structureof the Resuscitation Promoting Factor Interacting protein RipA mutated at E444 [Mycobacterium tuberculosis H37Rv]
3S0Q_A 7.33e-12 329 437 99 212
ChainA, INVASION PROTEIN [Mycobacterium tuberculosis]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
P13692 3.64e-20 316 436 404 515
Protein P54 OS=Enterococcus faecium OX=1352 PE=3 SV=2
P96645 9.70e-13 317 437 212 325
Probable endopeptidase YddH OS=Bacillus subtilis (strain 168) OX=224308 GN=yddH PE=3 SV=1
P9WHU3 4.49e-12 305 422 264 370
Probable endopeptidase Rv2190c OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) OX=83332 GN=Rv2190c PE=3 SV=1
P9WHU2 4.49e-12 305 422 264 370
Probable endopeptidase MT2245 OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) OX=83331 GN=MT2245 PE=3 SV=1
P67474 4.49e-12 305 422 264 370
Probable endopeptidase Mb2213c OS=Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97) OX=233413 GN=BQ2027_MB2213C PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

0.000805 0.998324 0.000250 0.000224 0.000200 0.000183

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000000155_00245.