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CAZyme Information: MGYG000000156_01394

You are here: Home > Sequence: MGYG000000156_01394

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Collinsella sp002232035
Lineage Bacteria; Actinobacteriota; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; Collinsella sp002232035
CAZyme ID MGYG000000156_01394
CAZy Family GH106
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
871 MGYG000000156_15|CGC1 95205.34 4.7426
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000156 2287007 Isolate China Asia
Gene Location Start: 8131;  End: 10746  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000000156_01394.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH106 38 870 1.2e-68 0.9466019417475728

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam17132 Glyco_hydro_106 5.10e-05 393 675 566 849
alpha-L-rhamnosidase.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
AZH68834.1 0.0 1 871 1 863
ATP54541.1 0.0 12 871 3 850
QNM10672.1 0.0 1 869 1 832
AGF57028.1 4.41e-255 8 870 7 846
AIQ48514.1 7.90e-207 7 869 6 865

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
6Q2F_A 1.91e-12 390 870 627 1139
Structureof Rhamnosidase from Novosphingobium sp. PP1Y [Novosphingobium sp. PP1Y]

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000039 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000000156_01394.