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CAZyme Information: MGYG000000158_00391

You are here: Home > Sequence: MGYG000000158_00391

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Collinsella sp003436275
Lineage Bacteria; Actinobacteriota; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; Collinsella sp003436275
CAZyme ID MGYG000000158_00391
CAZy Family CBM13
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
380 40769.52 6.3297
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000158 2308547 Isolate China Asia
Gene Location Start: 112526;  End: 113668  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000000158_00391.

CAZyme Signature Domains help

Family Start End Evalue family coverage
CBM13 64 218 9.3e-28 0.7659574468085106

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam14200 RicinB_lectin_2 1.65e-21 99 189 3 89
Ricin-type beta-trefoil lectin domain-like.
NF035929 lectin_1 3.41e-16 59 201 708 836
lectin. Lectins are important adhesin proteins, which bind carbohydrate structures on host cell surface. The carbohydrate specificity of diverse lectins to a large extent dictates bacteria tissue tropism by mediating specific attachment to unique host sites expressing the corresponding carbohydrate receptor.
pfam14200 RicinB_lectin_2 1.88e-14 148 213 1 66
Ricin-type beta-trefoil lectin domain-like.
pfam14200 RicinB_lectin_2 5.79e-12 53 142 4 89
Ricin-type beta-trefoil lectin domain-like.
pfam00652 Ricin_B_lectin 1.76e-11 66 199 5 126
Ricin-type beta-trefoil lectin domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QIA33416.1 1.16e-38 249 379 845 975
QRT49575.1 2.36e-22 1 164 613 779
QRT49576.1 2.16e-19 2 171 757 928
BAK44097.1 1.80e-17 1 172 878 1066
QGM63437.1 2.81e-17 1 171 450 628

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000029 0.000029 0.000002 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000000158_00391.