CAZyme Information: MGYG000000158_00393

Basic Information

• Species: Collinsella sp003436275
• Lineage: Bacteria; Actinobacteriota; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; Collinsella sp003436275
• CAZyme ID: MGYG000000158_00393
• CAZy Family: CBM13
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
1174		124108.94	4.8463

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000000158	2308547	Isolate	China	Asia

• Gene Location: Start: 114428; End: 117952 Strand: -

Full Sequence      

MSCSRYARGLAAISVVALAAGLFISSVGVSPLFADEVSTSGSDANRVIELGAADDGDGSF
APNSSIVLSSEGRSEDSSTSAVESADGTTPQDVESVEDLAFKNKGTLSDGATYVFACSNS
SRKVWDVAGGSSSNGANVQMYNSNMTKAQHWLVHEDENGFLTFENTGSGLVLDVSGGIAE
SGRNVQQYVANGTRAQKWIAVKDADGGLTIHSALNFDYVLDIAGGSSADGANVQLYKANQ
TAAQLFFAIDSNPVVDSLGQNVADGVYCFESAGLVLDVKGASAESGATLQSYAKNGTVAQ
AFRLTYNSASGYYTIASLVSGKLIDADYGSVVPRGAAHLYGSLDDAGSYTKNRFWILEPS
GEGFTIKNAANGLYLSFESGVAVTSTDAATWTLTQTKGFTWTQADIDAFAAAQGLQIPDG
TYALGMDSSPRSVVDVSGDSASNGANIQIYASNNTAAQRWVIKNALDSNGQPTGYVTIAH
AGTSSALDVTGGGKKSGNNVQQYAVNGTAAQRWIPVKQTNGSFVFYSGLGRNLVLDVNGG
SVSNGSNVQIWTANGSAAQRFIAIDANPHVGAGTQSVADGMYQINSVSDSSTCLDVAGGS
VSNGARIQTYATNGTMAQCFKLSYDSATGFYSIRSAKSTKGLDLDSGDIIPGAKVQQWDY
PGNGSNQQWRIEPVGYGYLIRSVASNLVLERKSDGSVTTAIESGSAAQHWTFETFAVSFS
EGCYSIHSDSTGKYLDVTGGSYADGAPLQVYTGNGTLAQKFWARKDDQGYYFFQCANSAK
YLSARESDGAILQISDKEADEVKWSIEICFGKGVELKNKKSGKVLSVSGSGGSVVCVDEN
GSAAQGWTIASVPLISDGFYEFAPMHAIGQRLDVAGGSRSNGANVQIYASNGTLSQRVWV
RSVGGGWYSLTACCSAYPLDVLNCSNADGANVQQWQWNGSNAQKWRFEMGERGIKIVSAC
GNKVLEVSDGATVNGANVQLWSYTGFAAQSWRALSAERPAKIGYQNPANYPQVSSLTVRL
PSYCTGEFTYVTPSRIAIDATRDDCVNAFIQRAYGYVGTRYIEPYSTPPGGAVDCSGFVL
QCLYATGMDMGIYNPYNHRWLAWQTSNSMNWYNNGTFLPVGVNSMQRGDVVYYRGHIAIY
LGDGRMIDSWPHQGVGVHGVYERGNPIGAARPFV

Enzyme Prediction     

No EC number prediction in MGYG000000158_00393.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
CBM13	652	763	7.8e-19	0.574468085106383
CBM13	814	947	2e-17	0.6702127659574468
CBM13	578	672	1.4e-16	0.4734042553191489
CBM13	109	201	9.3e-16	0.46808510638297873

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
pfam14200	RicinB_lectin_2	1.31e-19	148	236	2	89	Ricin-type beta-trefoil lectin domain-like.
pfam14200	RicinB_lectin_2	1.28e-17	456	551	1	89	Ricin-type beta-trefoil lectin domain-like.
pfam14200	RicinB_lectin_2	1.58e-16	900	981	7	89	Ricin-type beta-trefoil lectin domain-like.
pfam14200	RicinB_lectin_2	1.09e-15	843	935	1	89	Ricin-type beta-trefoil lectin domain-like.
NF035929	lectin_1	4.95e-15	382	561	669	834	lectin. Lectins are important adhesin proteins, which bind carbohydrate structures on host cell surface. The carbohydrate specificity of diverse lectins to a large extent dictates bacteria tissue tropism by mediating specific attachment to unique host sites expressing the corresponding carbohydrate receptor.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
QRT49576.1	4.21e-201	89	1174	103	1184
QRT49575.1	1.51e-47	405	910	270	779
BAK44091.1	1.66e-34	250	910	123	795
AMK55176.1	3.81e-18	417	896	512	967
ANE22412.1	5.11e-18	391	765	46	324

PDB Hits     

has no PDB hit.

Swiss-Prot Hits     

has no Swissprot hit.

SignalP and Lipop Annotations

This protein is predicted as SP

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.000483	0.998713	0.000222	0.000217	0.000181	0.000156

TMHMM  Annotations     

start	end
7	29