CAZyme Information: MGYG000000158_00394

Basic Information

• Species: Collinsella sp003436275
• Lineage: Bacteria; Actinobacteriota; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; Collinsella sp003436275
• CAZyme ID: MGYG000000158_00394
• CAZy Family: CBM13
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
1187		124994.19	4.5572

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000000158	2308547	Isolate	China	Asia

• Gene Location: Start: 118024; End: 121587 Strand: -

Full Sequence      

MRHIKCACTLLQAGCLLGLLLALSIGLNSGSTAFADTSSIGLSAEDAEHAEDAAGSVSDS
LSSDIAQEGESSDESLDSASEDSTEDVDLTKYATLDAGTYFLTSTLSGHRVLDVTSGSVS
AGAAIQLYGRHETAAQQFVLVDLGGRQYAFKNIKSGLFLCYPNDASHFSDHPRLTQNTGD
DGVWGFAWHARQVGGGFVFSPVADDDFAIDIAGASDSNGTEIRLYQSNESVAQTFTLEKP
KATILAELAAAHASDFADGTYYIRSAKSSWQALDVAGGSRSSGANVQIYALNATAAQTWN
ISHDQNGFVTLTNSGSGLVLDVSGGSAQSGTNVQQYASNGSAAQKWIAVKDGDSIKLVSA
LDPSICLDIAGGNTSSGTNVRTWSDNGTIAQRWTFFNLDVQREQLDALAQQNAGNIADGR
YVLALGVGGAKVLDVNGGSKANGGNVQSYVSNMTAAQQWDISHDELGYLIIKNVSSGKVL
NIAGGSCTLGTNIQQYSSNGSRAQRWIAVPSVPGGSFRLQSAVLPDLVLDVAGGSSSNGA
NIQTYVSNGTAAQNVRFVSAVPNVAPSDDLGLDGWFTISLASDSSHVFDISGGSSSNGAN
VQTYAANGTFAQVFKFVYEHGYYRIVNAQSGKALDVYGGNVCPGTNVHQWSGDGNNVNQL
FSIIRNDDGSYTATNKATGLVLSVANSNVYGDIPSDSASQHLAFTKLTSLLPEGYFTISN
SASSSAVLDIASGSASDGANVQLYGSNKSIAQKWKVAKVADRDNTYTVESLVSGKVLMAD
EDGNVCVRSFDNGDAQLWTAQIDKGGINFVNVATGKVLDAAGGSTSNGTNIRLYDSNGTL
AQSFKLSACSLVDSGTYVIAAASNRSKVLDVASGSRSNGANVQLWSSNDSGAQKWNINVN
SDGTISIQNCRSKKYLDVLNAQGASGANVQQWQGNGSSAQRWRVDYVNGGSFVIRSALND
SLVLDVNGGALNDGANIQIYAANGSDAQGFYFAQTSYTPEAVDLAVPVYNQYSVGLPNGC
ESAALTNVLNYYGFGVGPCEMADRWIPRSSWDFVWCFWGDPHSPNNGNEICAPGLNKAAN
NFLASSGSNLRSYDVSGTSLYDLCNYLDDGHPVIIWTTVHQGNVGYIYARQGGYFACVNS
HTVVLKGYNPQTNKVMISDTIDGYTTYDRDWIAWVYQQRGAQAIVIK

Enzyme Prediction     

No EC number prediction in MGYG000000158_00394.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
CBM13	214	358	1e-21	0.6542553191489362
CBM13	766	898	9e-21	0.675531914893617
CBM13	898	996	6.7e-20	0.5053191489361702
CBM13	584	687	1.7e-17	0.5212765957446809
CBM13	429	507	7.1e-16	0.40425531914893614

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
pfam14200	RicinB_lectin_2	3.56e-20	892	980	2	89	Ricin-type beta-trefoil lectin domain-like.
pfam14200	RicinB_lectin_2	5.26e-20	455	545	1	89	Ricin-type beta-trefoil lectin domain-like.
pfam13529	Peptidase_C39_2	1.27e-19	1006	1159	2	138	Peptidase_C39 like family.
pfam14200	RicinB_lectin_2	3.56e-18	295	383	1	89	Ricin-type beta-trefoil lectin domain-like.
NF035929	lectin_1	2.36e-17	298	506	654	834	lectin. Lectins are important adhesin proteins, which bind carbohydrate structures on host cell surface. The carbohydrate specificity of diverse lectins to a large extent dictates bacteria tissue tropism by mediating specific attachment to unique host sites expressing the corresponding carbohydrate receptor.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
QRT49575.1	8.97e-187	404	1187	270	1061
BAK44091.1	7.39e-74	248	997	131	885
QRT49576.1	5.34e-48	403	914	412	928
QOL34941.1	3.45e-24	102	471	614	982
AMK55176.1	9.44e-23	99	472	516	889

PDB Hits     

has no PDB hit.

Swiss-Prot Hits     

has no Swissprot hit.

SignalP and Lipop Annotations

This protein is predicted as SP

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.000731	0.998011	0.000655	0.000207	0.000185	0.000184

TMHMM  Annotations     

start	end
13	35