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CAZyme Information: MGYG000000160_01798

You are here: Home > Sequence: MGYG000000160_01798

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Collinsella sp003479805
Lineage Bacteria; Actinobacteriota; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; Collinsella sp003479805
CAZyme ID MGYG000000160_01798
CAZy Family GT2
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
289 MGYG000000160_20|CGC1 31294.38 6.7542
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000160 2098512 Isolate China Asia
Gene Location Start: 875;  End: 1744  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000000160_01798.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GT2 6 175 1.1e-22 0.9823529411764705

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
cd02525 Succinoglycan_BP_ExoA 9.11e-23 4 211 1 207
ExoA is involved in the biosynthesis of succinoglycan. Succinoglycan Biosynthesis Protein ExoA catalyzes the formation of a beta-1,3 linkage of the second sugar (glucose) of the succinoglycan with the galactose on the lipid carrie. Succinoglycan is an acidic exopolysaccharide that is important for invasion of the nodules. Succinoglycan is a high-molecular-weight polymer composed of repeating octasaccharide units. These units are synthesized on membrane-bound isoprenoid lipid carriers, beginning with galactose followed by seven glucose molecules, and modified by the addition of acetate, succinate, and pyruvate. ExoA is a membrane protein with a transmembrance domain at c-terminus.
pfam00535 Glycos_transf_2 3.73e-21 6 173 1 164
Glycosyl transferase family 2. Diverse family, transferring sugar from UDP-glucose, UDP-N-acetyl- galactosamine, GDP-mannose or CDP-abequose, to a range of substrates including cellulose, dolichol phosphate and teichoic acids.
COG1215 BcsA 1.04e-19 5 210 56 263
Glycosyltransferase, catalytic subunit of cellulose synthase and poly-beta-1,6-N-acetylglucosamine synthase [Cell motility].
COG0463 WcaA 2.15e-18 1 215 1 214
Glycosyltransferase involved in cell wall bisynthesis [Cell wall/membrane/envelope biogenesis].
COG1216 GT2 1.83e-17 1 222 1 230
Glycosyltransferase, GT2 family [Carbohydrate transport and metabolism].

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QUC03710.1 1.34e-101 1 289 1 292
QTL79525.1 4.08e-90 5 284 7 290
QTL77673.1 4.08e-90 5 284 7 290
BAQ27905.1 9.87e-90 5 284 2 285
ADB10600.1 9.87e-90 5 284 2 285

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
P26403 1.85e-43 5 260 3 258
O antigen biosynthesis rhamnosyltransferase RfbN OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) OX=99287 GN=rfbN PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000063 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000000160_01798.