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CAZyme Information: MGYG000000162_00431
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Enterococcus_B durans | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus_B; Enterococcus_B durans | |||||||||||
| CAZyme ID | MGYG000000162_00431 | |||||||||||
| CAZy Family | PL9 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 48240; End: 51482 Strand: - | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| PL9 | 470 | 856 | 4.3e-121 | 0.9813333333333333 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| pfam00746 | Gram_pos_anchor | 1.62e-05 | 1044 | 1079 | 6 | 42 | LPXTG cell wall anchor motif. |
| TIGR01167 | LPXTG_anchor | 1.27e-04 | 1046 | 1079 | 1 | 34 | LPXTG-motif cell wall anchor domain. This model describes the LPXTG motif-containing region found at the C-terminus of many surface proteins of Streptococcus and Streptomyces species. Cleavage between the Thr and Gly by sortase or a related enzyme leads to covalent anchoring at the new C-terminal Thr to the cell wall. Hits that do not lie at the C-terminus or are not found in Gram-positive bacteria are probably false-positive. A common feature of this proteins containing this domain appears to be a high proportion of charged and zwitterionic residues immediatedly upstream of the LPXTG motif. This model differs from other descriptions of the LPXTG region by including a portion of that upstream charged region. [Cell envelope, Other] |
| pfam13229 | Beta_helix | 0.002 | 556 | 692 | 1 | 114 | Right handed beta helix region. This region contains a parallel beta helix region that shares some similarity with Pectate lyases. |
| pfam13229 | Beta_helix | 0.005 | 586 | 666 | 77 | 141 | Right handed beta helix region. This region contains a parallel beta helix region that shares some similarity with Pectate lyases. |
| pfam13229 | Beta_helix | 0.008 | 602 | 763 | 1 | 126 | Right handed beta helix region. This region contains a parallel beta helix region that shares some similarity with Pectate lyases. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| ASV95398.1 | 0.0 | 1 | 1080 | 1 | 1080 |
| QPQ27721.1 | 0.0 | 1 | 1080 | 1 | 1080 |
| AKX86292.1 | 0.0 | 22 | 1080 | 1 | 1059 |
| AKZ47662.1 | 0.0 | 22 | 1080 | 1 | 1059 |
| AYQ60810.1 | 0.0 | 91 | 1079 | 90 | 1089 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 1RU4_A | 4.44e-37 | 475 | 751 | 18 | 293 | ChainA, Pectate lyase [Dickeya chrysanthemi] |
| 5OLQ_A | 5.43e-19 | 473 | 755 | 4 | 325 | Rhamnogalacturonanlyase [Bacteroides thetaiotaomicron],5OLQ_B Rhamnogalacturonan lyase [Bacteroides thetaiotaomicron],5OLQ_C Rhamnogalacturonan lyase [Bacteroides thetaiotaomicron],5OLR_A Rhamnogalacturonan lyase [Bacteroides thetaiotaomicron],5OLR_B Rhamnogalacturonan lyase [Bacteroides thetaiotaomicron],5OLR_C Rhamnogalacturonan lyase [Bacteroides thetaiotaomicron],5OLS_A Rhamnogalacturonan lyase [Bacteroides thetaiotaomicron] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| P22751 | 3.36e-46 | 93 | 735 | 34 | 623 | Pectate disaccharide-lyase OS=Dickeya chrysanthemi OX=556 GN=pelX PE=1 SV=1 |
| P0C1A6 | 2.39e-38 | 475 | 751 | 43 | 318 | Pectate lyase L OS=Dickeya chrysanthemi OX=556 GN=pelL PE=3 SV=1 |
| P0C1A7 | 3.95e-36 | 475 | 751 | 43 | 318 | Pectate lyase L OS=Dickeya dadantii (strain 3937) OX=198628 GN=pelL PE=1 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.000275 | 0.999029 | 0.000172 | 0.000192 | 0.000166 | 0.000152 |
