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CAZyme Information: MGYG000000169_01972

You are here: Home > Sequence: MGYG000000169_01972

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Eubacterium_G sp000432355
Lineage Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; Eubacterium_G; Eubacterium_G sp000432355
CAZyme ID MGYG000000169_01972
CAZy Family GH28
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
535 MGYG000000169_8|CGC3 58928.07 4.7313
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000169 2836880 Isolate China Asia
Gene Location Start: 93608;  End: 95215  Strand: +

Full Sequence      Download help

MLKENNSTET  KTDKPIGGKA  GFIIGCVIIY  WLALGIVWGC  VSLPGAIDKM  SQKSEIKNSK60
VVLYDGPKSL  KDATAEDLSV  VSEAERDMSL  KHCTDTKVTV  NGNDCYVYDT  NVNNTHAWVG120
SYMPKLSRTP  ITYFDFEGTV  EITVKAENID  IKSVTVRPLK  YDIKPEINTK  DHTVTFRVNT180
PDTYTVEFNN  STQRAVHIFA  NELENPEDIP  DAKDDDVFYI  GPGEWNIENM  VLSDNQTLYI240
SGGAVVHGIA  NANFAKNVTV  CGRGIIDNSN  LEGWKGRSAS  VPLKFDNCQD  VTIDGIISLN300
SNAWCLQVYN  TIGADINNVK  ILTARPNGDG  MSIQSTKSAK  ITNSFVRAWD  DALVVKNYDE360
NSANISFKNI  QVWTDLAQSM  EIGYETNKGQ  NEKSTITNVS  FEDITILHNF  HKPALSIHNA420
DDAAVSDIKY  KNIVVEDAEM  GRGDGTTDLI  DFSIVKNDNW  SSTQERGTIS  NVTIDGFKVL480
DGAKTLMVKF  KGYDAEHNIS  DVTIKGLNIK  GESITNDSKC  VSIDANTTSN  IKIEK535

Enzyme Prediction      help

No EC number prediction in MGYG000000169_01972.

CAZyme Signature Domains help

Created with Snap265380107133160187214240267294321347374401428454481508246523GH28
Family Start End Evalue family coverage
GH28 246 523 7.3e-37 0.7938461538461539

CDD Domains      download full data without filtering help

Created with Snap265380107133160187214240267294321347374401428454481508247370PLN02793283437Glyco_hydro_28205459Pgu1258370PLN03010
Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
PLN02793 PLN02793 4.91e-06 247 370 140 266
Probable polygalacturonase
pfam00295 Glyco_hydro_28 5.60e-06 283 437 88 238
Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism.
COG5434 Pgu1 1.31e-04 205 459 150 418
Polygalacturonase [Carbohydrate transport and metabolism].
PLN03010 PLN03010 1.51e-04 258 370 141 246
polygalacturonase

CAZyme Hits      help

Created with Snap26538010713316018721424026729432134737440142845448150856534ABX43664.1|GH2827534BCK00431.1|GH2849514ACK41503.1|CBM32|GH2860514ACI19833.1|CBM32|GH2861526QTE67472.1|GH28
Hit ID E-Value Query Start Query End Hit Start Hit End
ABX43664.1 2.08e-210 56 534 40 518
BCK00431.1 1.51e-193 27 534 8 520
ACK41503.1 1.17e-136 49 514 21 464
ACI19833.1 2.92e-134 60 514 32 464
QTE67472.1 2.71e-119 61 526 33 478

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.980733 0.007210 0.003398 0.000063 0.000035 0.008596

TMHMM  Annotations      download full data without filtering help

start end
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