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CAZyme Information: MGYG000000174_03562
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Parabacteroides faecis | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Tannerellaceae; Parabacteroides; Parabacteroides faecis | |||||||||||
| CAZyme ID | MGYG000000174_03562 | |||||||||||
| CAZy Family | GT32 | |||||||||||
| CAZyme Description | UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 95320; End: 97338 Strand: - | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GT32 | 22 | 101 | 1.3e-18 | 0.9333333333333333 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| COG0770 | MurF | 6.91e-89 | 261 | 672 | 27 | 448 | UDP-N-acetylmuramyl pentapeptide synthase [Cell wall/membrane/envelope biogenesis]. |
| TIGR01143 | murF | 6.06e-81 | 263 | 672 | 1 | 417 | UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase. This family consists of the strictly bacterial MurF gene of peptidoglycan biosynthesis. This enzyme is almost always UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase, but in a few species, MurE adds lysine rather than diaminopimelate. This enzyme acts on the product from MurE activity, and so is also subfamily rather than equivalog. Staphylococcus aureus is an example of species in this MurF protein would differ. [Cell envelope, Biosynthesis and degradation of murein sacculus and peptidoglycan] |
| PRK11929 | PRK11929 | 1.44e-73 | 263 | 669 | 531 | 954 | bifunctional UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase MurE/UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase MurF. |
| PRK11930 | PRK11930 | 1.40e-52 | 261 | 672 | 27 | 453 | putative bifunctional UDP-N-acetylmuramoyl-tripeptide:D-alanyl-D-alanine ligase/alanine racemase; Provisional |
| PRK10773 | murF | 3.35e-43 | 242 | 672 | 3 | 447 | UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase; Reviewed |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| QJE29668.1 | 0.0 | 1 | 672 | 1 | 672 |
| BBK92924.1 | 0.0 | 1 | 672 | 1 | 672 |
| QJE29906.1 | 5.22e-52 | 1 | 229 | 7 | 237 |
| AYD49052.1 | 9.07e-44 | 2 | 229 | 6 | 237 |
| QJE29905.1 | 5.05e-42 | 2 | 229 | 3 | 231 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 1GG4_A | 6.38e-42 | 244 | 672 | 5 | 446 | ChainA, UDP-N-ACETYLMURAMOYLALANYL-D-GLUTAMYL-2,6-DIAMINOPIMELATE-D-ALANYL-D-ALANYL LIGASE [Escherichia coli],1GG4_B Chain B, UDP-N-ACETYLMURAMOYLALANYL-D-GLUTAMYL-2,6-DIAMINOPIMELATE-D-ALANYL-D-ALANYL LIGASE [Escherichia coli] |
| 4QDI_A | 1.71e-41 | 261 | 666 | 46 | 462 | ChainA, UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [Acinetobacter baumannii AB307-0294] |
| 3ZM5_A | 2.06e-41 | 264 | 669 | 32 | 449 | CrystalStructure Of Murf Ligase In Complex With Cyanothiophene Inhibitor [Streptococcus pneumoniae R6],3ZM6_A Crystal Structure Of Murf Ligase In Complex With Cyanothiophene Inhibitor [Streptococcus pneumoniae R6] |
| 4QF5_A | 1.11e-40 | 261 | 666 | 46 | 462 | ChainA, UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [Acinetobacter baumannii AB307-0294],4QF5_B Chain B, UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [Acinetobacter baumannii AB307-0294] |
| 4ZIY_A | 1.15e-40 | 261 | 666 | 48 | 464 | ChainA, UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [Acinetobacter baumannii AB5075] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| P96613 | 3.39e-53 | 261 | 669 | 30 | 448 | UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase OS=Bacillus subtilis (strain 168) OX=224308 GN=murF PE=3 SV=1 |
| P11880 | 1.32e-44 | 244 | 672 | 5 | 446 | UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase OS=Escherichia coli (strain K12) OX=83333 GN=murF PE=1 SV=2 |
| P45450 | 4.03e-42 | 245 | 669 | 18 | 443 | UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=1111708 GN=murF PE=3 SV=1 |
| P57315 | 1.97e-41 | 242 | 669 | 8 | 444 | UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase OS=Buchnera aphidicola subsp. Acyrthosiphon pisum (strain APS) OX=107806 GN=murF PE=3 SV=1 |
| P45061 | 1.19e-39 | 256 | 670 | 23 | 449 | UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) OX=71421 GN=murF PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.999994 | 0.000050 | 0.000001 | 0.000000 | 0.000000 | 0.000000 |