CAZyme Information: MGYG000000174_04072

Basic Information

• Species: Parabacteroides faecis
• Lineage: Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Tannerellaceae; Parabacteroides; Parabacteroides faecis
• CAZyme ID: MGYG000000174_04072
• CAZy Family: PL35
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
608	MGYG000000174_16|CGC2	68248.69	5.827

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000000174	6515019	Isolate	China	Asia

• Gene Location: Start: 52605; End: 54431 Strand: -

Full Sequence      

MNKAALLVVFCMTLFVPVCAQGIHFDSYPSHPRLLVKQGEEQKIKSGLAHNPEILRLHEY
LLRQCDAFAMKPMLTYKKEGKRLLAVSREALRRIFYLSYAYRMTGEEKYLLRAEQEMIAV
CSFNDWNPSHFLDTGEMTMAVALGYDWLFDKLSPDTRKLVKEAILNKGFAPSRDKRYNWF
LSASNNWNQVCNAGLVYGALAVLEDHPEEAREIIERALSTVGLTLKGYAPDGAYPEGYNY
WGYGTTFQVLMNAALESALGSDGGLSEAEGFLASARFMQFMTGTTGKCFNFSDSRESVFA
LPAMYWFADKLQDPSLLWNEKDILSRAELSFSDEENRFLPLIPIYGSQYKMKELMPPATK
LWVGNGQTPVVLIRTGWQDGEGFYLGIKGGTASTSHAHMDAGSFVFDALGVRWVQDLGMQ
EYYSLEKENVDLWNSSQEGQRWDVFRYNNLAHSTLTVNGKYHRVKGFVPVTNIYSDDHKL
GASLEMTGLFGGDLKSAVREVALINEKYLSVTDRVQADGQPASVRWTIVTGAVPRVLDSH
MVELKKDGKCMQLIVDSPSATAVSILDNVSKNSYDAPNEGTYRVVLDVNLESGQSEEIKV
RLVPATDR

Enzyme Prediction     

No EC number prediction in MGYG000000174_04072.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
PL35	381	559	1.4e-59	0.9832402234636871

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
pfam07940	Hepar_II_III	6.26e-09	386	596	29	231	Heparinase II/III-like protein. This family features sequences that are similar to a region of the Flavobacterium heparinum proteins heparinase II and heparinase III. The former is known to degrade heparin and heparin sulphate, whereas the latter predominantly degrades heparin sulphate. Both are secreted into the periplasmic space upon induction with heparin.
pfam16332	DUF4962	0.004	30	208	136	331	Domain of unknown function (DUF4962). This family consists of uncharacterized proteins around 870 residues in length and is mainly found in various Bacteroides species. The function of this protein is unknown.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
QUT49750.1	3.52e-303	1	607	1	609
AYB29714.1	1.22e-251	20	604	18	600
QUR45369.1	1.20e-212	1	604	1	602
QIU93528.1	3.41e-212	1	604	1	602
QDH53590.1	9.02e-210	1	604	1	602

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
3A0O_A	3.41e-09	24	567	132	699	Crystalstructure of alginate lyase from Agrobacterium tumefaciens C58 [Agrobacterium fabrum str. C58],3A0O_B Crystal structure of alginate lyase from Agrobacterium tumefaciens C58 [Agrobacterium fabrum str. C58]
3AFL_A	7.79e-09	24	293	132	416	Crystalstructure of exotype alginate lyase Atu3025 H531A complexed with alginate trisaccharide [Agrobacterium fabrum str. C58]

Swiss-Prot Hits     

has no Swissprot hit.

SignalP and Lipop Annotations

This protein is predicted as SP

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.000184	0.999228	0.000144	0.000154	0.000141	0.000131

TMHMM  Annotations     

start	end
5	24