You are browsing environment: HUMAN GUT
CAZyme Information: MGYG000000187_00555
You are here: Home > Sequence: MGYG000000187_00555
Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Lachnospira sp003537285 | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; Lachnospira; Lachnospira sp003537285 | |||||||||||
| CAZyme ID | MGYG000000187_00555 | |||||||||||
| CAZy Family | CE8 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
|
|||||||||||
| Genome Property |
|
|||||||||||
| Gene Location | Start: 10986; End: 17639 Strand: + | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| CE8 | 1118 | 1403 | 5.3e-75 | 0.9652777777777778 |
| PL1 | 1548 | 1788 | 1.3e-40 | 0.8168316831683168 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| COG4677 | PemB | 2.29e-36 | 1111 | 1397 | 88 | 395 | Pectin methylesterase and related acyl-CoA thioesterases [Carbohydrate transport and metabolism, Lipid transport and metabolism]. |
| PLN02432 | PLN02432 | 1.17e-35 | 1123 | 1405 | 23 | 287 | putative pectinesterase |
| PLN02773 | PLN02773 | 2.36e-33 | 1116 | 1404 | 10 | 296 | pectinesterase |
| smart00656 | Amb_all | 7.19e-31 | 1552 | 1742 | 15 | 160 | Amb_all domain. |
| PLN02682 | PLN02682 | 4.85e-30 | 1123 | 1350 | 82 | 306 | pectinesterase family protein |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| ADD62022.1 | 0.0 | 8 | 2168 | 136 | 2326 |
| QEH70392.1 | 0.0 | 583 | 1889 | 463 | 1755 |
| ACZ98653.1 | 0.0 | 620 | 1889 | 90 | 1350 |
| ACR72234.1 | 1.12e-135 | 655 | 1405 | 307 | 1066 |
| QJS18636.1 | 2.87e-79 | 1452 | 1887 | 243 | 673 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 5GT5_A | 2.24e-74 | 1449 | 1887 | 2 | 446 | Structuralbasis of the specific activity and thermostability of pectate lyase (pelN) from Paenibacillus sp. 0602 [Paenibacillus sp. 0602],5GT5_B Structural basis of the specific activity and thermostability of pectate lyase (pelN) from Paenibacillus sp. 0602 [Paenibacillus sp. 0602] |
| 2NSP_A | 5.61e-37 | 1099 | 1408 | 2 | 339 | ChainA, Pectinesterase A [Dickeya dadantii 3937],2NSP_B Chain B, Pectinesterase A [Dickeya dadantii 3937],2NST_A Chain A, Pectinesterase A [Dickeya dadantii 3937],2NST_B Chain B, Pectinesterase A [Dickeya dadantii 3937],2NT6_A Chain A, Pectinesterase A [Dickeya dadantii 3937],2NT6_B Chain B, Pectinesterase A [Dickeya dadantii 3937],2NT9_A Chain A, Pectinesterase A [Dickeya dadantii 3937],2NT9_B Chain B, Pectinesterase A [Dickeya dadantii 3937] |
| 2NTB_A | 5.04e-33 | 1099 | 1408 | 2 | 339 | Crystalstructure of pectin methylesterase in complex with hexasaccharide V [Dickeya dadantii 3937],2NTB_B Crystal structure of pectin methylesterase in complex with hexasaccharide V [Dickeya dadantii 3937],2NTP_A Crystal structure of pectin methylesterase in complex with hexasaccharide VI [Dickeya dadantii 3937],2NTP_B Crystal structure of pectin methylesterase in complex with hexasaccharide VI [Dickeya dadantii 3937],2NTQ_A Crystal structure of pectin methylesterase in complex with hexasaccharide VII [Dickeya dadantii 3937],2NTQ_B Crystal structure of pectin methylesterase in complex with hexasaccharide VII [Dickeya dadantii 3937] |
| 1QJV_A | 5.04e-33 | 1099 | 1408 | 2 | 339 | ChainA, PECTIN METHYLESTERASE [Dickeya chrysanthemi],1QJV_B Chain B, PECTIN METHYLESTERASE [Dickeya chrysanthemi] |
| 5C1E_A | 9.86e-22 | 1111 | 1351 | 14 | 241 | CrystalStructure of the Pectin Methylesterase from Aspergillus niger in Penultimately Deglycosylated Form (N-acetylglucosamine Stub at Asn84) [Aspergillus niger ATCC 1015] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| D3JTC2 | 6.25e-70 | 1449 | 1785 | 31 | 366 | Pectate lyase B OS=Paenibacillus amylolyticus OX=1451 GN=pelB PE=1 SV=1 |
| P0C1A8 | 3.42e-32 | 1099 | 1408 | 26 | 363 | Pectinesterase A OS=Dickeya chrysanthemi OX=556 GN=pemA PE=1 SV=1 |
| P0C1A9 | 4.62e-32 | 1099 | 1408 | 26 | 363 | Pectinesterase A OS=Dickeya dadantii (strain 3937) OX=198628 GN=pemA PE=1 SV=1 |
| Q9ZQA3 | 2.39e-24 | 1117 | 1418 | 95 | 396 | Probable pectinesterase 15 OS=Arabidopsis thaliana OX=3702 GN=PME15 PE=2 SV=1 |
| Q9FM79 | 2.85e-24 | 1125 | 1351 | 94 | 318 | Pectinesterase QRT1 OS=Arabidopsis thaliana OX=3702 GN=QRT1 PE=1 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 1.000020 | 0.000020 | 0.000002 | 0.000000 | 0.000000 | 0.000000 |
