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CAZyme Information: MGYG000000188_01894

You are here: Home > Sequence: MGYG000000188_01894

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Collinsella sp003462685
Lineage Bacteria; Actinobacteriota; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; Collinsella sp003462685
CAZyme ID MGYG000000188_01894
CAZy Family GH140
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
437 MGYG000000188_26|CGC1 49145.34 4.9962
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000188 2272898 Isolate China Asia
Gene Location Start: 11101;  End: 12414  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000000188_01894.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH140 14 396 3e-87 0.8907766990291263

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam13204 DUF4038 9.14e-83 19 339 10 320
Protein of unknown function (DUF4038). A family of putative cellulases.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
ATP54527.1 0.0 1 437 1 437
AZH70520.1 3.53e-311 1 437 1 437
QWT17210.1 3.50e-200 1 433 1 435
AEB07692.1 5.78e-195 1 435 1 456
QRT29801.1 4.18e-149 3 433 1 422

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000022 0.000003 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000000188_01894.