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CAZyme Information: MGYG000000193_03306

You are here: Home > Sequence: MGYG000000193_03306

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species KLE1615 sp900066985
Lineage Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; KLE1615; KLE1615 sp900066985
CAZyme ID MGYG000000193_03306
CAZy Family PL17
CAZyme Description Alginate lyase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
674 MGYG000000193_46|CGC1 77308.87 6.0288
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000193 4116467 Isolate China Asia
Gene Location Start: 11687;  End: 13711  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000000193_03306.

CAZyme Signature Domains help

Family Start End Evalue family coverage
PL17 377 505 1.7e-46 0.9555555555555556

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam07940 Hepar_II_III 2.82e-08 373 534 12 168
Heparinase II/III-like protein. This family features sequences that are similar to a region of the Flavobacterium heparinum proteins heparinase II and heparinase III. The former is known to degrade heparin and heparin sulphate, whereas the latter predominantly degrades heparin sulphate. Both are secreted into the periplasmic space upon induction with heparin.
PRK06266 PRK06266 8.16e-04 5 79 87 145
transcription initiation factor E subunit alpha; Validated

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
BAR73165.1 0.0 1 665 1 652
QRV20012.1 1.23e-315 1 660 1 650
ADL05862.1 1.23e-315 1 660 1 650
SET91754.1 1.95e-310 1 670 1 657
AVM69429.1 3.51e-240 1 667 1 656

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
7BJT_A 3.38e-16 103 535 96 573
ChainA, Alginate lyase, family PL17 [Zobellia galactanivorans],7BJT_B Chain B, Alginate lyase, family PL17 [Zobellia galactanivorans]
7BM6_A 1.02e-15 103 535 96 573
ChainA, Alginate lyase, family PL17 [Zobellia galactanivorans],7BM6_B Chain B, Alginate lyase, family PL17 [Zobellia galactanivorans]
4NEI_A 5.29e-12 96 456 91 480
Alg17cPL17 Family Alginate Lyase [Saccharophagus degradans 2-40],4NEI_B Alg17c PL17 Family Alginate Lyase [Saccharophagus degradans 2-40]
4OJZ_A 1.59e-11 96 456 91 480
CrystalStructure of Alg17c Mutant Y258A Complexed with Alginate Trisaccharide [Saccharophagus degradans 2-40],4OJZ_B Crystal Structure of Alg17c Mutant Y258A Complexed with Alginate Trisaccharide [Saccharophagus degradans 2-40],4OK2_A Crystal Structure of Alg17c Mutant Y258A [Saccharophagus degradans 2-40],4OK2_B Crystal Structure of Alg17c Mutant Y258A [Saccharophagus degradans 2-40]
4OK4_A 1.10e-10 96 456 91 480
CrystalStructure of Alg17c Mutant H202L [Saccharophagus degradans 2-40],4OK4_B Crystal Structure of Alg17c Mutant H202L [Saccharophagus degradans 2-40]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q21FJ0 2.90e-11 96 456 91 480
Exo-oligoalginate lyase OS=Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) OX=203122 GN=alg17C PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000069 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000000193_03306.