You are browsing environment: HUMAN GUT

CAZyme Information: MGYG000000195_01534

You are here: Home > Sequence: MGYG000000195_01534

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Faecalibacterium prausnitzii_E
Lineage Bacteria; Firmicutes_A; Clostridia; Oscillospirales; Ruminococcaceae; Faecalibacterium; Faecalibacterium prausnitzii_E
CAZyme ID MGYG000000195_01534
CAZy Family GH23
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
3110 MGYG000000195_4|CGC1 351834.86 4.6173
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000195 3389403 Isolate China Asia
Gene Location Start: 315145;  End: 324477  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000000195_01534.

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG4646 COG4646 6.75e-68 1774 2295 1 540
Adenine-specific DNA methylase, N12 class [Replication, recombination and repair].
COG4646 COG4646 9.53e-25 2436 2625 439 635
Adenine-specific DNA methylase, N12 class [Replication, recombination and repair].
COG0827 YtxK 3.25e-11 1591 1758 173 348
Adenine-specific DNA methylase [Replication, recombination and repair].
smart00487 DEXDc 2.02e-09 2241 2396 9 164
DEAD-like helicases superfamily.
cd18011 DEXDc_RapA 2.51e-08 2241 2300 1 62
DEXH-box helicase domain of RapA. In bacteria, RapA is an RNA polymerase (RNAP)-associated SWI2/SNF2 (switch/sucrose non-fermentable) protein that mediates RNAP recycling during transcription. The ATPase activity of RapA is stimulated by its interaction with RNAP and inhibited by its N-terminal domain. The conformational changes of RapA and its interaction with RNAP are essential for RNAP recycling. RapA is part of the DEAD-like helicase superfamily, a diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
ASV45029.1 0.0 1478 2981 1548 3139
QIW86704.1 0.0 1478 2981 1616 3207
AEY69616.1 0.0 1478 2991 1689 3293
QIW86628.1 0.0 1478 2981 1616 3207
AXF51455.1 0.0 1478 3029 1782 3423

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q71TF8 1.30e-38 1486 2853 40 1619
Defense against restriction protein B OS=Escherichia phage P1 OX=2886926 GN=darB PE=3 SV=1
P52284 2.83e-06 1569 1759 26 214
Type II methyltransferase M.CvrRI OS=Paramecium bursaria Chlorella virus XZ-6E OX=36360 GN=CVIRIM PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

1.000059 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000000195_01534.