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CAZyme Information: MGYG000000198_02492
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Enterocloster citroniae | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; Enterocloster; Enterocloster citroniae | |||||||||||
| CAZyme ID | MGYG000000198_02492 | |||||||||||
| CAZy Family | GH28 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 600596; End: 602194 Strand: - | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH28 | 114 | 481 | 4.3e-74 | 0.9384615384615385 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| COG5434 | Pgu1 | 8.97e-94 | 93 | 462 | 83 | 466 | Polygalacturonase [Carbohydrate transport and metabolism]. |
| PLN02218 | PLN02218 | 1.74e-29 | 92 | 442 | 67 | 378 | polygalacturonase ADPG |
| PLN03003 | PLN03003 | 2.12e-29 | 93 | 408 | 24 | 301 | Probable polygalacturonase At3g15720 |
| pfam00295 | Glyco_hydro_28 | 8.12e-28 | 172 | 408 | 30 | 250 | Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism. |
| PLN02188 | PLN02188 | 2.66e-27 | 92 | 410 | 36 | 326 | polygalacturonase/glycoside hydrolase family protein |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| QIX91771.1 | 3.66e-292 | 1 | 527 | 1 | 516 |
| QQR03573.1 | 1.05e-291 | 1 | 527 | 1 | 516 |
| ANU47529.1 | 1.05e-291 | 1 | 527 | 1 | 516 |
| QJU22750.1 | 3.85e-287 | 1 | 529 | 1 | 518 |
| QRP36832.1 | 3.15e-286 | 1 | 529 | 1 | 518 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 3JUR_A | 3.38e-41 | 93 | 380 | 28 | 335 | Thecrystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_B The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_C The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_D The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima] |
| 5OLP_A | 6.53e-31 | 93 | 380 | 45 | 344 | Galacturonidase[Bacteroides thetaiotaomicron VPI-5482],5OLP_B Galacturonidase [Bacteroides thetaiotaomicron VPI-5482] |
| 1BHE_A | 8.67e-24 | 109 | 473 | 26 | 362 | ChainA, POLYGALACTURONASE [Pectobacterium carotovorum] |
| 2UVE_A | 1.34e-19 | 51 | 422 | 120 | 514 | Structureof Yersinia enterocolitica Family 28 Exopolygalacturonase [Yersinia enterocolitica],2UVE_B Structure of Yersinia enterocolitica Family 28 Exopolygalacturonase [Yersinia enterocolitica],2UVF_A Structure of Yersinia enterocolitica Family 28 Exopolygalacturonase in Complex with Digalaturonic Acid [Yersinia enterocolitica],2UVF_B Structure of Yersinia enterocolitica Family 28 Exopolygalacturonase in Complex with Digalaturonic Acid [Yersinia enterocolitica] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| P27644 | 3.89e-55 | 236 | 459 | 23 | 247 | Polygalacturonase OS=Rhizobium radiobacter OX=358 GN=pgl PE=2 SV=1 |
| A7PZL3 | 1.47e-47 | 92 | 480 | 62 | 432 | Probable polygalacturonase OS=Vitis vinifera OX=29760 GN=GSVIVT00026920001 PE=1 SV=1 |
| Q8RY29 | 1.52e-28 | 92 | 446 | 67 | 382 | Polygalacturonase ADPG2 OS=Arabidopsis thaliana OX=3702 GN=ADPG2 PE=2 SV=2 |
| Q9LW07 | 5.04e-28 | 93 | 417 | 24 | 310 | Probable polygalacturonase At3g15720 OS=Arabidopsis thaliana OX=3702 GN=At3g15720 PE=3 SV=1 |
| Q949Z1 | 2.05e-24 | 93 | 417 | 80 | 382 | Polygalacturonase At1g48100 OS=Arabidopsis thaliana OX=3702 GN=At1g48100 PE=2 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 1.000067 | 0.000000 | 0.000000 | 0.000000 | 0.000000 | 0.000000 |