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CAZyme Information: MGYG000000202_00174

You are here: Home > Sequence: MGYG000000202_00174

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species AF33-28 sp003477885
Lineage Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; AF33-28; AF33-28 sp003477885
CAZyme ID MGYG000000202_00174
CAZy Family GH78
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
761 MGYG000000202_1|CGC6 87412.88 4.7985
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000202 5162288 Isolate China Asia
Gene Location Start: 212916;  End: 215201  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000000202_00174.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH78 261 713 1.1e-45 0.8869047619047619

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam17389 Bac_rhamnosid6H 4.57e-09 364 558 5 184
Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain. This family consists of bacterial rhamnosidase A and B enzymes. L-Rhamnose is abundant in biomass as a common constituent of glycolipids and glycosides, such as plant pigments, pectic polysaccharides, gums or biosurfactants. Some rhamnosides are important bioactive compounds. For example, terpenyl glycosides, the glycosidic precursor of aromatic terpenoids, act as important flavouring substances in grapes. Other rhamnosides act as cytotoxic rhamnosylated terpenoids, as signal substances in plants or play a role in the antigenicity of pathogenic bacteria.
smart00363 S4 0.002 339 375 22 58
S4 RNA-binding domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
AJY74261.1 1.70e-135 11 712 18 735
QUH27875.1 5.15e-134 6 739 1 746
BBD46135.1 9.18e-134 5 708 41 759
QGY42778.1 1.72e-132 10 715 37 757
QHI69947.1 2.30e-132 11 691 7 687

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.999889 0.000138 0.000012 0.000001 0.000000 0.000004

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000000202_00174.