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CAZyme Information: MGYG000000202_00432

You are here: Home > Sequence: MGYG000000202_00432

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species AF33-28 sp003477885
Lineage Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; AF33-28; AF33-28 sp003477885
CAZyme ID MGYG000000202_00432
CAZy Family GH105
CAZyme Description Unsaturated rhamnogalacturonyl hydrolase YesR
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
371 MGYG000000202_1|CGC16 41850.75 5.0633
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000202 5162288 Isolate China Asia
Gene Location Start: 527533;  End: 528648  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000000202_00432.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH105 48 367 1.1e-98 0.9578313253012049

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG4225 YesR 3.14e-93 49 365 33 346
Rhamnogalacturonyl hydrolase YesR [Carbohydrate transport and metabolism].
pfam07470 Glyco_hydro_88 2.31e-85 23 367 6 338
Glycosyl Hydrolase Family 88. Unsaturated glucuronyl hydrolase catalyzes the hydrolytic release of unsaturated glucuronic acids from oligosaccharides (EC:3.2.1.-) produced by the reactions of polysaccharide lyases.
cd00688 ISOPREN_C2_like 0.002 160 366 28 198
This group contains class II terpene cyclases, protein prenyltransferases beta subunit, two broadly specific proteinase inhibitors alpha2-macroglobulin (alpha (2)-M) and pregnancy zone protein (PZP) and, the C3 C4 and C5 components of vertebrate complement. Class II terpene cyclases include squalene cyclase (SQCY) and 2,3-oxidosqualene cyclase (OSQCY), these integral membrane proteins catalyze a cationic cyclization cascade converting linear triterpenes to fused ring compounds. The protein prenyltransferases include protein farnesyltransferase (FTase) and geranylgeranyltransferase types I and II (GGTase-I and GGTase-II) which catalyze the carboxyl-terminal lipidation of Ras, Rab, and several other cellular signal transduction proteins, facilitating membrane associations and specific protein-protein interactions. Alpha (2)-M is a major carrier protein in serum and involved in the immobilization and entrapment of proteases. PZP is a pregnancy associated protein. Alpha (2)-M and PZP are known to bind to and, may modulate, the activity of placental protein-14 in T-cell growth and cytokine production thereby protecting the allogeneic fetus from attack by the maternal immune system.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
SEU08345.1 4.63e-174 1 370 1 370
QHQ63096.1 5.90e-170 1 370 1 370
AIQ28570.1 1.81e-164 1 370 1 371
AIQ40335.1 4.22e-163 1 370 1 371
AIQ71725.1 6.93e-162 1 370 1 371

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
3QWT_A 2.87e-79 39 367 54 375
ChainA, Putative GH105 family protein [Salmonella enterica subsp. enterica serovar Paratyphi A],3QWT_B Chain B, Putative GH105 family protein [Salmonella enterica subsp. enterica serovar Paratyphi A],3QWT_C Chain C, Putative GH105 family protein [Salmonella enterica subsp. enterica serovar Paratyphi A],3QWT_D Chain D, Putative GH105 family protein [Salmonella enterica subsp. enterica serovar Paratyphi A]
3PMM_A 5.21e-77 39 367 55 376
ChainA, Putative cytoplasmic protein [Klebsiella pneumoniae subsp. pneumoniae MGH 78578]
4XUV_A 1.78e-75 39 367 36 367
Crystalstructure of a glycoside hydrolase family 105 (GH105) enzyme from Thielavia terrestris [Thermothielavioides terrestris NRRL 8126],4XUV_B Crystal structure of a glycoside hydrolase family 105 (GH105) enzyme from Thielavia terrestris [Thermothielavioides terrestris NRRL 8126]
1NC5_A 5.32e-21 50 340 39 336
Structureof Protein of Unknown Function of YteR from Bacillus Subtilis [Bacillus subtilis],2D8L_A Crystal Structure of Unsaturated Rhamnogalacturonyl Hydrolase in complex with dGlcA-GalNAc [Bacillus subtilis]
2GH4_A 2.25e-20 50 340 29 326
ChainA, Putative glycosyl hydrolase yteR [Bacillus subtilis]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
O31521 3.30e-57 40 367 18 334
Unsaturated rhamnogalacturonyl hydrolase YesR OS=Bacillus subtilis (strain 168) OX=224308 GN=yesR PE=1 SV=1
O34559 2.91e-20 50 340 39 336
Unsaturated rhamnogalacturonyl hydrolase YteR OS=Bacillus subtilis (strain 168) OX=224308 GN=yteR PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000091 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000000202_00432.