logo
sublogo
You are browsing environment: HUMAN GUT
help

CAZyme Information: MGYG000000208_02329

You are here: Home > Sequence: MGYG000000208_02329

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Eubacterium_G ventriosum
Lineage Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; Eubacterium_G; Eubacterium_G ventriosum
CAZyme ID MGYG000000208_02329
CAZy Family GH136
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
1861 MGYG000000208_10|CGC1 204318.39 4.9922
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000208 2760783 Isolate China Asia
Gene Location Start: 8267;  End: 13852  Strand: +

Full Sequence      Download help

MKQKKMLALL  LSLAMIVTTV  LGNGTFVSAS  ATKATTGISY  YVDSVNGNDD  NDGTSETKAW60
KSLEKVNATT  FKPGDKLRFK  RGCSWSGLLS  PKGSGEKGNP  ITIDAYGDVK  DGRPVINGDS120
WCGDKGDDLE  NRVFNTAVYF  YNQEYWEITS  IEVTNHTKTK  DDHIKKYGIL  IMGQDAGTLH180
EINVKNTYVH  DVISIPIGQQ  AGIGRGGIVY  AIRGNKKATN  WEDITVEGNY  VKNVNHYGIN240
FISTWGSSTF  PDESGINEGG  GGTYRSKNLV  IRSNYCENVG  NAAICPSDYE  NALIEYNVAN300
GCNSGPNGNV  PIWWEHGQKT  ICQYNEVFGS  GASGDKEDSQ  AFDADVYADL  NYVQYNYTHD360
NPSGSFFECA  LGTSYQTYYR  YNISVNDGYG  TNRYGGGAVL  TLCQGGNGSL  DAYNNLIYMD420
ADHDGSITRS  WDDTTAVTST  DRFKIRNNVI  ITEAQKIDDN  GVNKAQAWDS  RYMGVVNNNA480
YGGANLNNRR  ADDENARVAV  KSDYVKLEEG  TSATVEDVNG  EFKITYGTVD  GYKLKDGATV540
IDQGISVIDN  GGQDFYGNEV  KSFVKPNIGA  DNSYNSGIKE  DLGEGKILLD  FDDCNNGALT600
GVYSNCDFGN  RGWNVTDGKL  WATSYTNEEQ  ANKIAIPDKY  ALTSFEAYCA  KGTATVKVEA660
GEESETFTVT  GKKQTFTTNF  KKQVPATYIV  IKSDNGVDQV  KFDNIVLSKK  KRISDTETNI720
SLDKTVTTSS  QSDWDPGCVG  SNIVDGDETT  MWISNGWSNQ  GDTVTEDRAN  FVVDLDGSYN780
IEKLDVTFGG  DKAKSAWKYK  VEASTDKTNW  DVIWDQTANE  EVASTQKVTL  DESITEKKYS840
YVRFTFGDTI  EDAWPAVAEF  NVYRPKELTN  FALDGEATAS  TVSRDPANAI  DGNDGTLWVG900
DGDSEKEGAW  WMVDLGKAQQ  IQAFDLVFEH  EVLPTLEDAQ  AATTPAYGQA  WQYKVEGSND960
KSSWDMLWDN  TANTDFSKEQ  YGKIAAEYAN  NKYQYVRVTL  TQLPLHKESR  VAVWPAIGEV1020
KVLGEEVINP  EEENKIVLTE  KGQNIDIDLA  YSQPVTVSSS  KDGENVTDRD  ANTTWTPDAD1080
DENPSLTIGL  DREYNIENFS  VDFEGEAAPY  KVLVNTSEGW  VEAGSCDSKD  SGKVVSASKD1140
EITGIKFQFE  KGMTAKVSEV  HFDGVDAKVK  HHKRILVMAP  HEDDEMLMAG  GVMNRAVANG1200
DEVYVVYATN  GDYSGVDHGK  LRIRDTVNAL  NTIGVPTDHL  YFLGYADNGG  MGVGQYTTAF1260
TDSFVYNIFI  ADDNKVISSR  NGVTKTYGDE  SVRNDYHYLM  TGEHASYTRA  NFLADLESVM1320
KSVNPTDVYM  TSRYDMHYDH  AYFGLFGNEA  IKNIQKENDK  FQPTVHEAII  HSHMTDEVYP1380
KDQGNYGWGK  ELNTYLGAWQ  HLDGLEEKTM  LNWSERENVL  TPYSMRQGPF  KYNLKDQALR1440
KYSTEYYNWI  ASFSKVNEVF  YKHETNSIGS  LATVTASSEN  SSDSRWDDQS  AVKAVDGIAD1500
GYATGLANKH  TRFPWAEWVT  KNEGKGAWLN  LAYDEAQKVT  TIKLYDRPNT  DDHITKSHLE1560
FEDGTTLEVG  ELPNDGAVKE  ISLGEGKEVK  NIKFVVDEVS  ESTTAVGLAE  IEVIKAEVKK1620
PEETTTTPGS  EETTTPGTGE  ETTTPATGET  TTKPAAGETT  TAPTTTTAKA  NEGTTTVAAN1680
KDTPSGATGL  KVPTVVSSKK  LSAKATYKLR  LKNTKGAKVY  TYTSNKKVAT  ISNKGVIKTK1740
KKGKAKLTIC  IQKGSVVSQY  YFNVKVKGKA  KTSFKVSKIS  KAGKNLAVAD  ETVLKKGKSK1800
KIKLANLASG  ATVKYATSNK  KVAKVSKKGK  VKAVKKGKAT  IKITVTSGGK  TYTLYHVVKV1860
K1861

Enzyme Prediction      help

No EC number prediction in MGYG000000208_02329.

CAZyme Signature Domains help

Created with Snap9318627937246555865174483793010231116120913021395148815811674176739570GH1368791002CBM32
Family Start End Evalue family coverage
GH136 39 570 5.3e-110 0.9877800407331976
CBM32 879 1002 3e-16 0.7903225806451613

CDD Domains      download full data without filtering help

Created with Snap9318627937246555865174483793010231116120913021395148815811674176711771249PIG-L725860F5_F8_type_C8761002F5_F8_type_C11711233PRK0212211731247LmbE
Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam02585 PIG-L 3.83e-13 1177 1249 1 79
GlcNAc-PI de-N-acetylase. Members of this family are related to PIG-L an N-acetylglucosaminylphosphatidylinositol de-N-acetylase (EC:3.5.1.89) that catalyzes the second step in GPI biosynthesis.
pfam00754 F5_F8_type_C 4.24e-09 725 860 1 127
F5/8 type C domain. This domain is also known as the discoidin (DS) domain family.
pfam00754 F5_F8_type_C 1.01e-08 876 1002 1 114
F5/8 type C domain. This domain is also known as the discoidin (DS) domain family.
PRK02122 PRK02122 4.66e-07 1171 1233 368 430
glucosamine-6-phosphate deaminase-like protein; Validated
COG2120 LmbE 2.63e-06 1173 1247 11 87
N-acetylglucosaminyl deacetylase, LmbE family [Carbohydrate transport and metabolism].

CAZyme Hits      help

Created with Snap93186279372465558651744837930102311161209130213951488158116741767371037QMW76217.1|CBM32|GH136371037QIB55915.1|CBM32|GH1365761613QRO38183.1|CBM325761613QBF74995.1|CBM32271024QRO38181.1|CBM32|GH136
Hit ID E-Value Query Start Query End Hit Start Hit End
QMW76217.1 5.17e-247 37 1037 33 1048
QIB55915.1 5.17e-247 37 1037 33 1048
QRO38183.1 1.40e-243 576 1613 24 1021
QBF74995.1 1.40e-243 576 1613 24 1021
QRO38181.1 5.66e-243 27 1024 25 1041

PDB Hits      download full data without filtering help

Created with Snap93186279372465558651744837930102311161209130213951488158116741767335707V6M_A285737V6I_A305705GQC_A403876KQT_A403876KQS_A
Hit ID E-Value Query Start Query End Hit Start Hit End Description
7V6M_A 6.29e-41 33 570 4 574
ChainA, Fibronectin type III domain-containing protein [Tyzzerella nexilis]
7V6I_A 1.06e-37 28 573 4 609
ChainA, Lacto-N-biosidase [Bifidobacterium saguini DSM 23967]
5GQC_A 5.30e-35 30 570 10 594
Crystalstructure of lacto-N-biosidase LnbX from Bifidobacterium longum subsp. longum, ligand-free form [Bifidobacterium longum subsp. longum],5GQC_B Crystal structure of lacto-N-biosidase LnbX from Bifidobacterium longum subsp. longum, ligand-free form [Bifidobacterium longum subsp. longum],5GQC_C Crystal structure of lacto-N-biosidase LnbX from Bifidobacterium longum subsp. longum, ligand-free form [Bifidobacterium longum subsp. longum],5GQC_D Crystal structure of lacto-N-biosidase LnbX from Bifidobacterium longum subsp. longum, ligand-free form [Bifidobacterium longum subsp. longum],5GQC_E Crystal structure of lacto-N-biosidase LnbX from Bifidobacterium longum subsp. longum, ligand-free form [Bifidobacterium longum subsp. longum],5GQC_F Crystal structure of lacto-N-biosidase LnbX from Bifidobacterium longum subsp. longum, ligand-free form [Bifidobacterium longum subsp. longum],5GQC_G Crystal structure of lacto-N-biosidase LnbX from Bifidobacterium longum subsp. longum, ligand-free form [Bifidobacterium longum subsp. longum],5GQC_H Crystal structure of lacto-N-biosidase LnbX from Bifidobacterium longum subsp. longum, ligand-free form [Bifidobacterium longum subsp. longum],5GQF_A Crystal structure of lacto-N-biosidase LnbX from Bifidobacterium longum subsp. longum, lacto-N-biose complex [Bifidobacterium longum subsp. longum],5GQF_B Crystal structure of lacto-N-biosidase LnbX from Bifidobacterium longum subsp. longum, lacto-N-biose complex [Bifidobacterium longum subsp. longum],5GQG_A Crystal structure of lacto-N-biosidase LnbX from Bifidobacterium longum subsp. longum, galacto-N-biose complex [Bifidobacterium longum subsp. longum],5GQG_B Crystal structure of lacto-N-biosidase LnbX from Bifidobacterium longum subsp. longum, galacto-N-biose complex [Bifidobacterium longum subsp. longum]
6KQT_A 2.21e-27 40 387 247 617
CrystalStructure of GH136 lacto-N-biosidase from Eubacterium ramulus - native protein [Eubacterium ramulus ATCC 29099]
6KQS_A 1.19e-26 40 387 247 617
CrystalStructure of GH136 lacto-N-biosidase from Eubacterium ramulus - selenomethionine derivative [Eubacterium ramulus ATCC 29099]

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000276 0.999101 0.000181 0.000158 0.000145 0.000133

TMHMM  Annotations      download full data without filtering help

start end
7 29