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CAZyme Information: MGYG000000209_01245

You are here: Home > Sequence: MGYG000000209_01245

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Eubacterium_F sp003491505
Lineage Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; Eubacterium_F; Eubacterium_F sp003491505
CAZyme ID MGYG000000209_01245
CAZy Family CBM22
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
758 MGYG000000209_7|CGC1 83319.51 9.4129
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000209 3107681 Isolate China Asia
Gene Location Start: 9928;  End: 12204  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

EC 2.4.1.-

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH10 392 754 1.1e-67 0.9570957095709571
CBM22 228 352 9.7e-33 0.9694656488549618

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
smart00633 Glyco_10 1.13e-56 460 752 4 263
Glycosyl hydrolase family 10.
pfam00331 Glyco_hydro_10 1.24e-53 383 754 1 310
Glycosyl hydrolase family 10.
COG3693 XynA 5.38e-45 407 750 42 335
Endo-1,4-beta-xylanase, GH35 family [Carbohydrate transport and metabolism].
pfam02018 CBM_4_9 4.68e-25 231 355 8 134
Carbohydrate binding domain. This family includes diverse carbohydrate binding domains.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
CDM69886.1 2.34e-91 382 757 203 559
AQR94159.1 3.58e-88 358 755 18 396
AGF55273.1 6.24e-88 358 755 18 392
ABX41884.1 7.01e-87 353 757 144 516
AFU34339.1 7.33e-83 356 757 148 521

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
2W5F_A 5.36e-41 220 749 18 521
ChainA, ENDO-1,4-BETA-XYLANASE Y [Acetivibrio thermocellus],2W5F_B Chain B, ENDO-1,4-BETA-XYLANASE Y [Acetivibrio thermocellus]
2WYS_A 5.53e-38 232 749 30 521
ChainA, ENDO-1,4-BETA-XYLANASE Y [Acetivibrio thermocellus],2WYS_B Chain B, ENDO-1,4-BETA-XYLANASE Y [Acetivibrio thermocellus],2WZE_A Chain A, ENDO-1,4-BETA-XYLANASE Y [Acetivibrio thermocellus],2WZE_B Chain B, ENDO-1,4-BETA-XYLANASE Y [Acetivibrio thermocellus]
6FHE_A 1.09e-31 412 753 35 339
Highlyactive enzymes by automated modular backbone assembly and sequence design [synthetic construct]
7NL2_A 1.18e-30 416 758 37 343
ChainA, Beta-xylanase [Pseudothermotoga thermarum DSM 5069],7NL2_B Chain B, Beta-xylanase [Pseudothermotoga thermarum DSM 5069]
5OFJ_A 1.04e-29 410 756 30 339
Crystalstructure of N-terminal domain of bifunctional CbXyn10C [Caldicellulosiruptor bescii DSM 6725]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
P23551 2.52e-63 382 758 37 385
Endo-1,4-beta-xylanase A OS=Butyrivibrio fibrisolvens OX=831 GN=xynA PE=3 SV=1
Q60037 1.02e-47 221 730 200 665
Endo-1,4-beta-xylanase A OS=Thermotoga maritima (strain ATCC 43589 / DSM 3109 / JCM 10099 / NBRC 100826 / MSB8) OX=243274 GN=xynA PE=1 SV=1
P36917 1.18e-47 232 754 203 674
Endo-1,4-beta-xylanase A OS=Thermoanaerobacterium saccharolyticum OX=28896 GN=xynA PE=1 SV=1
Q60042 4.33e-47 221 730 195 661
Endo-1,4-beta-xylanase A OS=Thermotoga neapolitana OX=2337 GN=xynA PE=1 SV=1
P51584 1.84e-39 222 749 31 532
Endo-1,4-beta-xylanase Y OS=Acetivibrio thermocellus OX=1515 GN=xynY PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.006426 0.989394 0.003178 0.000481 0.000254 0.000217

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000000209_01245.