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CAZyme Information: MGYG000000209_02018

You are here: Home > Sequence: MGYG000000209_02018

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Eubacterium_F sp003491505
Lineage Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; Eubacterium_F; Eubacterium_F sp003491505
CAZyme ID MGYG000000209_02018
CAZy Family GH10
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
785 85381.07 9.6975
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000209 3107681 Isolate China Asia
Gene Location Start: 8244;  End: 10601  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000000209_02018.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH10 402 780 3.7e-72 0.9702970297029703

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam00331 Glyco_hydro_10 3.10e-62 397 780 1 310
Glycosyl hydrolase family 10.
smart00633 Glyco_10 3.05e-61 439 778 1 263
Glycosyl hydrolase family 10.
COG3693 XynA 1.13e-40 419 783 47 342
Endo-1,4-beta-xylanase, GH35 family [Carbohydrate transport and metabolism].
pfam04886 PT 2.61e-08 146 181 1 36
PT repeat. This short repeat is composed on the tetrapeptide XPTX. This repeat is found in a variety of proteins, however it is not clear if these repeats are homologous to each other. The alignment represents nine copies of this repeat.
pfam04886 PT 1.59e-06 144 177 3 36
PT repeat. This short repeat is composed on the tetrapeptide XPTX. This repeat is found in a variety of proteins, however it is not clear if these repeats are homologous to each other. The alignment represents nine copies of this repeat.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
ACZ98618.1 2.00e-125 384 782 285 664
AUZ20632.1 6.88e-114 394 785 61 436
QUA53142.1 7.30e-103 385 782 23 405
AHF23772.1 1.19e-100 394 782 32 405
AHF25185.1 1.67e-98 394 782 50 423

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
7NL2_A 1.01e-40 406 780 20 339
ChainA, Beta-xylanase [Pseudothermotoga thermarum DSM 5069],7NL2_B Chain B, Beta-xylanase [Pseudothermotoga thermarum DSM 5069]
2W5F_A 4.27e-39 315 782 97 528
ChainA, ENDO-1,4-BETA-XYLANASE Y [Acetivibrio thermocellus],2W5F_B Chain B, ENDO-1,4-BETA-XYLANASE Y [Acetivibrio thermocellus]
2WYS_A 4.08e-36 315 782 97 528
ChainA, ENDO-1,4-BETA-XYLANASE Y [Acetivibrio thermocellus],2WYS_B Chain B, ENDO-1,4-BETA-XYLANASE Y [Acetivibrio thermocellus],2WZE_A Chain A, ENDO-1,4-BETA-XYLANASE Y [Acetivibrio thermocellus],2WZE_B Chain B, ENDO-1,4-BETA-XYLANASE Y [Acetivibrio thermocellus]
5OFJ_A 4.25e-35 396 744 7 304
Crystalstructure of N-terminal domain of bifunctional CbXyn10C [Caldicellulosiruptor bescii DSM 6725]
6D5C_A 1.34e-34 396 780 19 349
Structureof Caldicellulosiruptor danielii GH10 module of glycoside hydrolase WP_045175321 [Caldicellulosiruptor danielii],6D5C_B Structure of Caldicellulosiruptor danielii GH10 module of glycoside hydrolase WP_045175321 [Caldicellulosiruptor danielii],6D5C_C Structure of Caldicellulosiruptor danielii GH10 module of glycoside hydrolase WP_045175321 [Caldicellulosiruptor danielii]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
P51584 6.81e-38 315 782 108 539
Endo-1,4-beta-xylanase Y OS=Acetivibrio thermocellus OX=1515 GN=xynY PE=1 SV=1
Q60037 1.49e-36 352 756 321 665
Endo-1,4-beta-xylanase A OS=Thermotoga maritima (strain ATCC 43589 / DSM 3109 / JCM 10099 / NBRC 100826 / MSB8) OX=243274 GN=xynA PE=1 SV=1
Q60042 8.06e-36 352 756 317 661
Endo-1,4-beta-xylanase A OS=Thermotoga neapolitana OX=2337 GN=xynA PE=1 SV=1
P26223 4.48e-34 406 744 11 303
Endo-1,4-beta-xylanase B OS=Butyrivibrio fibrisolvens OX=831 GN=xynB PE=3 SV=1
P23551 4.34e-33 384 745 28 354
Endo-1,4-beta-xylanase A OS=Butyrivibrio fibrisolvens OX=831 GN=xynA PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000266 0.999049 0.000170 0.000194 0.000158 0.000130

TMHMM  Annotations      download full data without filtering help

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