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CAZyme Information: MGYG000000211_02889
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Bacteroides sp900556215 | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; Bacteroides sp900556215 | |||||||||||
| CAZyme ID | MGYG000000211_02889 | |||||||||||
| CAZy Family | GH28 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 114939; End: 116324 Strand: - | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH28 | 184 | 443 | 3.4e-42 | 0.7569230769230769 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| COG5434 | Pgu1 | 3.61e-10 | 197 | 455 | 230 | 470 | Polygalacturonase [Carbohydrate transport and metabolism]. |
| pfam00295 | Glyco_hydro_28 | 8.23e-09 | 188 | 440 | 88 | 305 | Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism. |
| PLN03010 | PLN03010 | 2.46e-04 | 171 | 376 | 118 | 311 | polygalacturonase |
| pfam13229 | Beta_helix | 0.003 | 188 | 303 | 3 | 109 | Right handed beta helix region. This region contains a parallel beta helix region that shares some similarity with Pectate lyases. |
| PLN02218 | PLN02218 | 0.009 | 256 | 440 | 242 | 410 | polygalacturonase ADPG |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| ALJ62050.1 | 0.0 | 1 | 461 | 1 | 461 |
| QUT92200.1 | 0.0 | 1 | 461 | 1 | 461 |
| QUU00181.1 | 0.0 | 12 | 461 | 15 | 464 |
| QUT34117.1 | 4.87e-315 | 12 | 461 | 15 | 464 |
| QJR77942.1 | 1.01e-284 | 1 | 461 | 4 | 464 |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| B8MW78 | 1.01e-06 | 211 | 440 | 263 | 478 | Probable endopolygalacturonase D OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=pgaD PE=3 SV=1 |
| Q2UT29 | 1.01e-06 | 211 | 440 | 263 | 478 | Probable endopolygalacturonase D OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=pgaD PE=3 SV=2 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.000295 | 0.999052 | 0.000167 | 0.000162 | 0.000157 | 0.000147 |