CAZyme Information: MGYG000000221_00787

Basic Information

• Species: Parabacteroides bouchesdurhonensis
• Lineage: Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Tannerellaceae; Parabacteroides; Parabacteroides bouchesdurhonensis
• CAZyme ID: MGYG000000221_00787
• CAZy Family: GH127
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
681	MGYG000000221_2|CGC4	78174.79	5.7313

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000000221	3481201	Isolate	China	Asia

• Gene Location: Start: 206567; End: 208612 Strand: -

Full Sequence      

MKHLAMAALAVLITAIPVAAKTETGNTGSINVNYPNNRYPLVTKPYMELPIGTIRPSGWL
QEQLQRMSDGMTGNLDQVYEIVMGPRNGWLGGDGDVWERGPYWIDGLLPLAYILNDQKLI
KKVQPWIEWTLASQKENGYFGPDTDRPYEQGLQRDNAQDWWPKMVMLKIMQQYYSATGDQ
RVIKFFTNYFKYQLNELPKNPLGKWTFWGERRGGDNLMIVYWLYNITGDKFLLDLGELIH
KQTFNWTDIFLQKDYLARQHSLHCVNLAQGFKEPVIYYQQSGDQKQLEAVKTACNTIRNT
IGLPTGLWGGDELIRFGNPTAGSELCTAVEMMLSLEKMLEITGDVQWADHLERVAYNALP
TQVTDNYDARQYYQQTNQVAVTREWRNFVTPHDDTDILFGTLTGYPCCTSNLHQGWPKLV
QNLWYATADNGIAALIYAPSQVTAKVADNVTVKIEEKTNYPFDEQISFNLSFPEKTKEAF
FPIHLRIPEWCRNAVITLNGKALDVDNFAGEITRINRKWKHGDQLCIELPMQVSSSQWYD
GAAVIERGPLLYALKMNEKWEKKQFDKKDAAIYGDWYYEVTSDSPWNYALSHKDLRPENI
NKSFIVEKAKTIAPYPWNVENAPVSIKAKGKRLNGWTLYRGSAGDISYFTQQGNDFGEEE
TIELIPYGCTTLRITEFPLRN

Enzyme Prediction     

No EC number prediction in MGYG000000221_00787.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH127	318	553	9.5e-36	0.4351145038167939

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
pfam07944	Glyco_hydro_127	2.25e-65	87	553	51	503	Beta-L-arabinofuranosidase, GH127. One member of this family, from Bidobacterium longicum, UniProtKB:E8MGH8, has been characterized as an unusual beta-L-arabinofuranosidase enzyme, EC:3.2.1.185. It rleases l-arabinose from the l-arabinofuranose (Araf)-beta1,2-Araf disaccharide and also transglycosylates 1-alkanols with retention of the anomeric configuration. Terminal beta-l-arabinofuranosyl residues have been found in arabinogalactan proteins from a mumber of different plantt species. beta-l-Arabinofuranosyl linkages with 1-4 arabinofuranosides are also found in the sugar chains of extensin and solanaceous lectins, hydroxyproline (Hyp)2-rich glycoproteins that are widely observed in plant cell wall fractions. The critical residue for catalytic activity is Glu-338, in a ET/SCAS sequence context.
COG3533	COG3533	9.75e-28	116	554	84	502	Uncharacterized conserved protein, DUF1680 family [Function unknown].

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
ATP55412.1	6.16e-152	34	679	28	650
ALL07583.1	9.31e-151	31	679	25	650
QNK64903.1	1.07e-148	9	679	3	644
QNF30112.1	6.16e-146	37	678	31	654
AMP98056.1	1.65e-144	34	679	28	650

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
4QJY_A	3.84e-25	44	555	24	562	Crystalstructure of native Ara127N, a GH127 beta-L-arabinofuranosidase from Geobacillus Stearothermophilus T6 [Geobacillus stearothermophilus],4QJY_B Crystal structure of native Ara127N, a GH127 beta-L-arabinofuranosidase from Geobacillus Stearothermophilus T6 [Geobacillus stearothermophilus]
5MQO_A	7.43e-24	52	555	60	609	Glycosidehydrolase BT_1003 [Bacteroides thetaiotaomicron]
4QK0_A	8.22e-23	44	555	24	562	Crystalstructure of Ara127N-Se, a GH127 beta-L-arabinofuranosidase from Geobacillus Stearothermophilus T6 [Geobacillus stearothermophilus],4QK0_B Crystal structure of Ara127N-Se, a GH127 beta-L-arabinofuranosidase from Geobacillus Stearothermophilus T6 [Geobacillus stearothermophilus],4QK0_C Crystal structure of Ara127N-Se, a GH127 beta-L-arabinofuranosidase from Geobacillus Stearothermophilus T6 [Geobacillus stearothermophilus],4QK0_D Crystal structure of Ara127N-Se, a GH127 beta-L-arabinofuranosidase from Geobacillus Stearothermophilus T6 [Geobacillus stearothermophilus]
6EX6_A	1.59e-15	93	585	69	572	TheGH127, Beta-arabinofuranosidase, BT3674 [Bacteroides thetaiotaomicron VPI-5482],6EX6_B The GH127, Beta-arabinofuranosidase, BT3674 [Bacteroides thetaiotaomicron VPI-5482]
3WRE_A	1.25e-12	212	552	224	565	Thecrystal structure of native HypBA1 from Bifidobacterium longum JCM 1217 [Bifidobacterium longum subsp. longum JCM 1217],3WRG_A The complex structure of HypBA1 with L-arabinose [Bifidobacterium longum subsp. longum JCM 1217]

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
E8MGH8	6.85e-12	212	552	224	565	Non-reducing end beta-L-arabinofuranosidase OS=Bifidobacterium longum subsp. longum (strain ATCC 15707 / DSM 20219 / JCM 1217 / NCTC 11818 / E194b) OX=565042 GN=hypBA1 PE=1 SV=1

SignalP and Lipop Annotations

This protein is predicted as SP

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.000229	0.999140	0.000164	0.000166	0.000153	0.000137

TMHMM  Annotations     

There is no transmembrane helices in MGYG000000221_00787.