logo
sublogo
You are browsing environment: HUMAN GUT
help

CAZyme Information: MGYG000000221_01309

You are here: Home > Sequence: MGYG000000221_01309

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Parabacteroides bouchesdurhonensis
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Tannerellaceae; Parabacteroides; Parabacteroides bouchesdurhonensis
CAZyme ID MGYG000000221_01309
CAZy Family CBM62
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
654 75990.66 6.708
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000221 3481201 Isolate China Asia
Gene Location Start: 138649;  End: 140613  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000000221_01309.

CAZyme Signature Domains help

Family Start End Evalue family coverage
CBM62 420 516 4.5e-22 0.7099236641221374

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam00754 F5_F8_type_C 5.01e-07 542 633 13 111
F5/8 type C domain. This domain is also known as the discoidin (DS) domain family.
pfam01841 Transglut_core 4.76e-04 202 282 19 102
Transglutaminase-like superfamily. This family includes animal transglutaminases and other bacterial proteins of unknown function. Sequence conservation in this superfamily primarily involves three motifs that centre around conserved cysteine, histidine, and aspartate residues that form the catalytic triad in the structurally characterized transglutaminase, the human blood clotting factor XIIIa'. On the basis of the experimentally demonstrated activity of the Methanobacterium phage pseudomurein endoisopeptidase, it is proposed that many, if not all, microbial homologs of the transglutaminases are proteases and that the eukaryotic transglutaminases have evolved from an ancestral protease.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
ABR45148.1 5.59e-242 3 654 2 660
QCY54736.1 5.59e-242 3 654 2 660
QRO14748.1 5.59e-242 3 654 2 660
QUT52565.1 5.59e-242 3 654 2 660
QUT20637.1 5.59e-242 3 654 2 660

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
2YB7_A 5.31e-08 450 515 70 137
ChainA, Carbohydrate Binding Family 6 [Acetivibrio thermocellus],2YB7_B Chain B, Carbohydrate Binding Family 6 [Acetivibrio thermocellus],2YFU_A Chain A, Carbohydrate Binding Family 6 [Acetivibrio thermocellus],2YFZ_A Chain A, Carbohydrate Binding Family 6 [Acetivibrio thermocellus],2YG0_A Chain A, Carbohydrate Binding Family 6 [Acetivibrio thermocellus]
5G56_A 1.27e-06 450 515 771 838
ChainA, Carbohydrate Binding Family 6 [Acetivibrio thermocellus]

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as LIPO

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.001056 0.428073 0.569875 0.000341 0.000363 0.000287

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000000221_01309.