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CAZyme Information: MGYG000000223_00898

You are here: Home > Sequence: MGYG000000223_00898

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species NSJ-61 sp003433845
Lineage Bacteria; Firmicutes; Bacilli; Erysipelotrichales; Erysipelotrichaceae; NSJ-61; NSJ-61 sp003433845
CAZyme ID MGYG000000223_00898
CAZy Family PL35
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
1466 MGYG000000223_3|CGC3 165432.13 5.0473
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000223 4367631 Isolate China Asia
Gene Location Start: 184738;  End: 189138  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000000223_00898.

CAZyme Signature Domains help

Family Start End Evalue family coverage
PL35 1134 1309 5.6e-58 0.9720670391061452

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam07940 Hepar_II_III 1.25e-08 1134 1300 20 185
Heparinase II/III-like protein. This family features sequences that are similar to a region of the Flavobacterium heparinum proteins heparinase II and heparinase III. The former is known to degrade heparin and heparin sulphate, whereas the latter predominantly degrades heparin sulphate. Both are secreted into the periplasmic space upon induction with heparin.
pfam02368 Big_2 2.39e-08 529 604 2 77
Bacterial Ig-like domain (group 2). This family consists of bacterial domains with an Ig-like fold. Members of this family are found in bacterial and phage surface proteins such as intimins.
pfam17963 Big_9 1.08e-07 681 764 4 90
Bacterial Ig domain. This entry represents a wide variety of bacterial Ig domains.
pfam17892 Cadherin_5 2.41e-07 713 767 33 89
Cadherin-like domain.
COG5492 YjdB 6.61e-07 511 604 165 259
Uncharacterized conserved protein YjdB, contains Ig-like domain [General function prediction only].

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QNM12507.1 0.0 1 1466 1 1466
QBJ75653.1 0.0 196 1380 37 1249
ATD55359.1 0.0 196 1380 37 1249
ATD56968.1 0.0 196 1380 37 1249
SLK19471.1 0.0 196 1380 37 1249

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
3A0O_A 3.23e-12 745 1281 86 661
Crystalstructure of alginate lyase from Agrobacterium tumefaciens C58 [Agrobacterium fabrum str. C58],3A0O_B Crystal structure of alginate lyase from Agrobacterium tumefaciens C58 [Agrobacterium fabrum str. C58]
3AFL_A 1.26e-11 745 1281 86 661
Crystalstructure of exotype alginate lyase Atu3025 H531A complexed with alginate trisaccharide [Agrobacterium fabrum str. C58]

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000468 0.998819 0.000256 0.000162 0.000155 0.000148

TMHMM  Annotations      download full data without filtering help

start end
7 29
1443 1460