CAZyme Information: MGYG000000224_00103

Basic Information

• Species: Bacteroides sp003545565
• Lineage: Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; Bacteroides sp003545565
• CAZyme ID: MGYG000000224_00103
• CAZy Family: GH30
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
547	MGYG000000224_1|CGC2	61699.96	4.7231

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000000224	3747034	Isolate	China	Asia

• Gene Location: Start: 153264; End: 154907 Strand: -

Full Sequence      

MKIFVLNLFFVFIGLSLWSCSDDNGKITDNEGKSVYALFLKNNIEVSNTGGTAIAIVEWS
QTEWEISFGTGDIVVDVTPMSGGSIEQVEQTTRLKITCTGNDTHKSRSQFIYIINKTTGE
KSDLLIKQDVAYQTLTLQIDPLEKYQPVVGFGGMYNPKIWCGGFLITPEQMNKMYGSNGL
GYSILRLMIYPDETDWSADVAAAKMAQDNGAIIFACPWDCTDALSDKVTVAGKEVQHLKT
ENYEAYANHLIKYINFMRQNGINLYAISVQNEPDMEFTYWTPQEVVAFVKQYGAKIRATG
VKLMSPESCGTSPDYTDPIMNDIEAFFNTDILVGHLYQGFINIEQPGYEKNRHDYICGLY
SRLSGKTWWMTEHLFNDGEKEEDSGKWEFSTWEYCFSHLAKEIHMCMEGYCSAYVYWYLK
RFYGMIGDNDKRSPVGEGEITKNGYILSHYARYATNTIRIKVTADNQDLCATAYINKAGN
EITLVLLNMTGNTQKVEIPLAGIRQIHAVETTEYKNMEAIEANSLEKTDGSYVMLSGYSI
ASVKLAL

Enzyme Prediction     

EC	3.2.1.8	3.2.1.136

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH30	136	500	7.4e-113	0.97953216374269

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
COG5520	XynC	7.11e-59	139	456	38	338	O-Glycosyl hydrolase [Cell wall/membrane/envelope biogenesis].
pfam02055	Glyco_hydro_30	7.65e-04	202	338	87	237	Glycosyl hydrolase family 30 TIM-barrel domain.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
QUT90760.1	1.66e-279	1	547	1	546
ALJ58222.1	1.66e-279	1	547	1	546
EDO10799.1	1.84e-262	8	545	10	545
QRQ55177.1	1.84e-262	8	545	10	545
ALJ48333.1	1.84e-262	8	545	10	545

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
4UQA_A	4.44e-55	146	517	33	383	ChainA, Carbohydrate Binding Family 6 [Acetivibrio thermocellus]
4CKQ_A	2.33e-54	146	517	33	383	ChainA, Carbohydrate Binding Family 6 [Acetivibrio thermocellus],4UQ9_A Chain A, Carbohydrate Binding Family 6 [Acetivibrio thermocellus],4UQB_A Chain A, Carbohydrate Binding Family 6 [Acetivibrio thermocellus],4UQC_A Chain A, Carbohydrate Binding Family 6 [Acetivibrio thermocellus],4UQD_A Chain A, Carbohydrate Binding Family 6 [Acetivibrio thermocellus],4UQE_A Chain A, Carbohydrate Binding Family 6 [Acetivibrio thermocellus]
5A6L_A	1.70e-53	146	517	33	383	ChainA, Carbohydrate Binding Family 6 [Acetivibrio thermocellus],5A6M_A Chain A, Carbohydrate Binding Family 6 [Acetivibrio thermocellus ATCC 27405]
3GTN_A	2.73e-53	146	537	14	372	CrystalStructure of XynC from Bacillus subtilis 168 [Bacillus subtilis],3GTN_B Crystal Structure of XynC from Bacillus subtilis 168 [Bacillus subtilis],3KL0_A Crystal structure of the glucuronoxylan xylanohydrolase XynC from Bacillus subtilis [Bacillus subtilis subsp. subtilis str. 168],3KL0_B Crystal structure of the glucuronoxylan xylanohydrolase XynC from Bacillus subtilis [Bacillus subtilis subsp. subtilis str. 168],3KL0_C Crystal structure of the glucuronoxylan xylanohydrolase XynC from Bacillus subtilis [Bacillus subtilis subsp. subtilis str. 168],3KL0_D Crystal structure of the glucuronoxylan xylanohydrolase XynC from Bacillus subtilis [Bacillus subtilis subsp. subtilis str. 168],3KL3_A Crystal structure of Ligand bound XynC [Bacillus subtilis subsp. subtilis str. 168],3KL3_B Crystal structure of Ligand bound XynC [Bacillus subtilis subsp. subtilis str. 168],3KL3_C Crystal structure of Ligand bound XynC [Bacillus subtilis subsp. subtilis str. 168],3KL3_D Crystal structure of Ligand bound XynC [Bacillus subtilis subsp. subtilis str. 168],3KL5_A Structure Analysis of a Xylanase From Glycosyl Hydrolase Family Thirty: Carbohydrate Ligand Complexes Reveal this Family of Enzymes Unique Mechanism of Substrate Specificity and Recognition [Bacillus subtilis],3KL5_B Structure Analysis of a Xylanase From Glycosyl Hydrolase Family Thirty: Carbohydrate Ligand Complexes Reveal this Family of Enzymes Unique Mechanism of Substrate Specificity and Recognition [Bacillus subtilis],3KL5_C Structure Analysis of a Xylanase From Glycosyl Hydrolase Family Thirty: Carbohydrate Ligand Complexes Reveal this Family of Enzymes Unique Mechanism of Substrate Specificity and Recognition [Bacillus subtilis],3KL5_D Structure Analysis of a Xylanase From Glycosyl Hydrolase Family Thirty: Carbohydrate Ligand Complexes Reveal this Family of Enzymes Unique Mechanism of Substrate Specificity and Recognition [Bacillus subtilis]
4QAW_A	5.50e-52	146	488	13	330	Structureof modular Xyn30D from Paenibacillus barcinonensis [Paenibacillus barcinonensis],4QAW_B Structure of modular Xyn30D from Paenibacillus barcinonensis [Paenibacillus barcinonensis],4QAW_C Structure of modular Xyn30D from Paenibacillus barcinonensis [Paenibacillus barcinonensis],4QAW_D Structure of modular Xyn30D from Paenibacillus barcinonensis [Paenibacillus barcinonensis],4QAW_E Structure of modular Xyn30D from Paenibacillus barcinonensis [Paenibacillus barcinonensis],4QAW_F Structure of modular Xyn30D from Paenibacillus barcinonensis [Paenibacillus barcinonensis],4QAW_G Structure of modular Xyn30D from Paenibacillus barcinonensis [Paenibacillus barcinonensis],4QAW_H Structure of modular Xyn30D from Paenibacillus barcinonensis [Paenibacillus barcinonensis]

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
Q45070	2.45e-52	146	537	45	403	Glucuronoxylanase XynC OS=Bacillus subtilis (strain 168) OX=224308 GN=xynC PE=1 SV=1
Q6YK37	1.31e-51	146	532	46	407	Glucuronoxylanase XynC OS=Bacillus subtilis OX=1423 GN=xynC PE=3 SV=2

SignalP and Lipop Annotations

This protein is predicted as LIPO

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.000047	0.026329	0.973613	0.000010	0.000013	0.000012

TMHMM  Annotations     

There is no transmembrane helices in MGYG000000224_00103.