CAZyme Information: MGYG000000224_01276

Basic Information

• Species: Bacteroides sp003545565
• Lineage: Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; Bacteroides sp003545565
• CAZyme ID: MGYG000000224_01276
• CAZy Family: PL15
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
845	MGYG000000224_4|CGC1	97312.68	9.4113

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000000224	3747034	Isolate	China	Asia

• Gene Location: Start: 65634; End: 68171 Strand: +

Full Sequence      

MKKQAIRQWALILVLVLTTMPATLAQKTNLERVHENVRVTPYPQQDNPLYLNPSPLIVPA
QMRKAEFLQFQLSQNQAFPAEKTIQSKPLPWCMFNPHTVLKNGTWYWRFRSISKDKKATE
WSETYHFNVTEDVPQFVTPTFDTFFKNLPKAYPRMYCFLNKGLEKGKATIATHPEYKEMK
RRADGAMNNSYETNPQPYKAMAKIALDFNFLHTIYRATGEKQYADKMLAVIRALLAVPHD
MTLNNDFICGDILDTFLQVYDACHDQLTDAERKEIEKRVFASAKYHHKQHRNGGVENHIF
DNHYWQRTFREMLQLGVMFGDTRDDAKEILEYCYELWTARAPASAFNHDGEWHNGQGYFN
ANTKTLWYVPALLSYVTKTDFLQHPFYKNLGRALVYAFPPRSKSAGFGDGNEKENAPQRQ
RVALADYLARELQDPYAIWYCNETKAATGDFDSRLQRIGSLKSYPASAPLPADAPKALWM
QDTGELLAHSNLNRYRENTFLSFRSSPFGSGSHTLADQNGFNLHYRGVPVYRSTGYYLHF
NDPHNLLSYRHTRAHNTILVDGIGQPFTTRAYGKIVRMLSGKNISYACGDASNAYCGLTD
YPMWKKNFKSVKVEESVANGFGETPLKKYRRHILLLHPNIVVIYDELEAEKPVRWDWLLH
SPVQFKLDENGKDKTLTTYYPEKKFTSTAYMFSNSDCTLSQTDKFFSAPDPKKMRKGRSY
PNQWHMTAAYEKSTANRILTVILLLPDGSKPYTVIHDKNGTPNDFILAGKWKLRAQLDPK
QPAELLIRDPKSGVLFSLGNKNLRIEGEDYKRTPGTSVLFDEMDGKWTIHEMSDIEPRPT
GKVTK

Enzyme Prediction     

No EC number prediction in MGYG000000224_01276.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
PL15	492	647	2.9e-49	0.9776119402985075

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
pfam16332	DUF4962	4.85e-79	31	451	1	455	Domain of unknown function (DUF4962). This family consists of uncharacterized proteins around 870 residues in length and is mainly found in various Bacteroides species. The function of this protein is unknown.
pfam07940	Hepar_II_III	9.65e-14	486	672	8	177	Heparinase II/III-like protein. This family features sequences that are similar to a region of the Flavobacterium heparinum proteins heparinase II and heparinase III. The former is known to degrade heparin and heparin sulphate, whereas the latter predominantly degrades heparin sulphate. Both are secreted into the periplasmic space upon induction with heparin.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
QRQ49807.1	3.00e-315	25	843	18	833
QUT44273.1	2.21e-300	56	843	1	785
QRQ48971.1	7.82e-278	33	842	18	825
QUT44689.1	7.82e-278	33	842	18	825
QIU94214.1	1.90e-250	35	845	46	850

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
6LJA_A	9.16e-107	27	839	27	866	ChainA, Heparinase II/III-like protein [Bacteroides intestinalis DSM 17393]
6LJL_A	4.99e-104	27	839	27	866	ChainA, Heparinase II/III-like protein [Bacteroides intestinalis DSM 17393]
3A0O_A	1.64e-33	71	781	56	775	Crystalstructure of alginate lyase from Agrobacterium tumefaciens C58 [Agrobacterium fabrum str. C58],3A0O_B Crystal structure of alginate lyase from Agrobacterium tumefaciens C58 [Agrobacterium fabrum str. C58]
3AFL_A	2.74e-32	71	781	56	775	Crystalstructure of exotype alginate lyase Atu3025 H531A complexed with alginate trisaccharide [Agrobacterium fabrum str. C58]

Swiss-Prot Hits     

has no Swissprot hit.

SignalP and Lipop Annotations

This protein is predicted as SP

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.000481	0.998688	0.000292	0.000189	0.000168	0.000154

TMHMM  Annotations     

There is no transmembrane helices in MGYG000000224_01276.