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CAZyme Information: MGYG000000224_02925
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Bacteroides sp003545565 | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; Bacteroides sp003545565 | |||||||||||
| CAZyme ID | MGYG000000224_02925 | |||||||||||
| CAZy Family | GH3 | |||||||||||
| CAZyme Description | Xylan 1,4-beta-xylosidase | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 32262; End: 34853 Strand: + | |||||||||||
Full Sequence Download help
| MQVRWHLLVV VFILANISLK AQDNGGCNDC PAFNASGKIE VRGVKERIIG DLSQPISVRI | 60 |
| ENIIRQMTLE EKVAQLSNES DSIPRLNLPS YNYWNECLHG VARAGEVTVF PQAINLASTW | 120 |
| DTLLVKRIAS AISTEARLKY LDIGKGLTYW APTINMARDP RWGRNEETYG EDPYLTSRLG | 180 |
| VAFVKGLQGD HPNYLKTVAT VKHFVANNQE NDRFSSSSQI PTKQLYEYYF PAYEACVKEA | 240 |
| NVQSIMTAYN AFNGIPPSGS TWLLEDVLRK EWGFDGFVVS DCGAIGVMNW QHRIVNSLEE | 300 |
| AAALGINSGC DLECGGTYRE NLVAAVQRGL VSEYAIDRAL TRVLTTRFKL GEFDPIELVP | 360 |
| YNHYDKKLLA GEQFRRLAYE AAVKSIILLK NEDNFLPIDK KDVRSIAIVG PFADNNYLGG | 420 |
| YSGKPVHNIS LLQGVKKMVG EEVEISYIEG TSVVSPVDSS YLLASDGVNN GLTADYIDGH | 480 |
| DLNSPFLFSR IDKTVGFDWG DGTPDQRLTK NDFSVRWSGY LKAPVDGKHA IGVYADGGVR | 540 |
| VWLNGSLVLD EWNAHGLQYY SVEVLLENGK KIPIKIEYIN RIGAATCILV SDFGNINQID | 600 |
| KVKKIVSRAD LVLVALGNDG KLARENRDLP SIYLPMTQEL LLKEIYKVNP RIALILQTGN | 660 |
| PLTSQWAAEH VPSILQAWYP GQEGGAALAG ILFGLENPSG KLPMTIYESE QQLPNILDYD | 720 |
| IWKGRTYQYL SSKPLYGFGH GLSYSNFEYA DLQCNDVVHV DGTLQCSIKV KNISDVVGEE | 780 |
| VIQVYVSREK TPVYTFPLKK LIAFARVNLK PNESKTVTFT ITPRQLSVWQ DGEWKMLSGK | 840 |
| YSLFVGGGQK ELSKGMNKDF EIK | 863 |
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH3 | 82 | 314 | 5e-73 | 0.9814814814814815 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| PLN03080 | PLN03080 | 2.15e-125 | 51 | 853 | 44 | 776 | Probable beta-xylosidase; Provisional |
| PRK15098 | PRK15098 | 1.31e-114 | 60 | 846 | 38 | 751 | beta-glucosidase BglX. |
| COG1472 | BglX | 5.67e-84 | 83 | 446 | 55 | 394 | Periplasmic beta-glucosidase and related glycosidases [Carbohydrate transport and metabolism]. |
| pfam00933 | Glyco_hydro_3 | 1.68e-61 | 96 | 345 | 73 | 315 | Glycosyl hydrolase family 3 N terminal domain. |
| pfam01915 | Glyco_hydro_3_C | 7.89e-47 | 386 | 744 | 1 | 216 | Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| QUT44546.1 | 0.0 | 1 | 807 | 1 | 807 |
| ANQ59504.1 | 0.0 | 8 | 863 | 10 | 720 |
| AKA50865.1 | 0.0 | 8 | 863 | 10 | 720 |
| QUU05885.1 | 0.0 | 8 | 863 | 10 | 720 |
| BAD47583.1 | 0.0 | 8 | 863 | 10 | 720 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 5Z87_A | 7.65e-85 | 73 | 854 | 108 | 779 | ChainA, EmGH1 [Aurantiacibacter marinus],5Z87_B Chain B, EmGH1 [Aurantiacibacter marinus] |
| 7MS2_A | 1.47e-82 | 56 | 852 | 1 | 660 | ChainA, Thermostable beta-glucosidase B [Acetivibrio thermocellus AD2],7MS2_B Chain B, Thermostable beta-glucosidase B [Acetivibrio thermocellus AD2] |
| 7VC6_A | 1.06e-79 | 53 | 845 | 20 | 717 | ChainA, xylan 1,4-beta-xylosidase [Phanerodontia chrysosporium] |
| 7VC7_A | 1.06e-79 | 53 | 845 | 20 | 717 | ChainA, xylan 1,4-beta-xylosidase [Phanerodontia chrysosporium] |
| 5XXL_A | 1.02e-78 | 71 | 852 | 67 | 744 | Crystalstructure of GH3 beta-glucosidase from Bacteroides thetaiotaomicron [Bacteroides thetaiotaomicron VPI-5482],5XXL_B Crystal structure of GH3 beta-glucosidase from Bacteroides thetaiotaomicron [Bacteroides thetaiotaomicron VPI-5482],5XXM_A Crystal structure of GH3 beta-glucosidase from Bacteroides thetaiotaomicron in complex with gluconolactone [Bacteroides thetaiotaomicron VPI-5482],5XXM_B Crystal structure of GH3 beta-glucosidase from Bacteroides thetaiotaomicron in complex with gluconolactone [Bacteroides thetaiotaomicron VPI-5482] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| D5EY15 | 1.08e-129 | 59 | 858 | 34 | 856 | Xylan 1,4-beta-xylosidase OS=Prevotella ruminicola (strain ATCC 19189 / JCM 8958 / 23) OX=264731 GN=xyl3A PE=1 SV=1 |
| T2KMH0 | 3.65e-110 | 54 | 850 | 31 | 711 | Beta-xylosidase OS=Formosa agariphila (strain DSM 15362 / KCTC 12365 / LMG 23005 / KMM 3901 / M-2Alg 35-1) OX=1347342 GN=BN863_22130 PE=1 SV=1 |
| P27034 | 1.26e-98 | 60 | 845 | 2 | 795 | Beta-glucosidase OS=Rhizobium radiobacter OX=358 GN=cbg-1 PE=3 SV=1 |
| Q94KD8 | 8.50e-95 | 52 | 846 | 47 | 750 | Probable beta-D-xylosidase 2 OS=Arabidopsis thaliana OX=3702 GN=BXL2 PE=2 SV=1 |
| A1CCL9 | 1.28e-90 | 51 | 850 | 44 | 745 | Probable exo-1,4-beta-xylosidase bxlB OS=Aspergillus clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1 / QM 1276 / 107) OX=344612 GN=bxlB PE=3 SV=2 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.000181 | 0.999232 | 0.000155 | 0.000149 | 0.000137 | 0.000131 |