Species | Enterobacter kobei | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|
Lineage | Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Enterobacter; Enterobacter kobei | |||||||||||
CAZyme ID | MGYG000000235_03651 | |||||||||||
CAZy Family | GT9 | |||||||||||
CAZyme Description | Lipopolysaccharide core heptosyltransferase RfaQ | |||||||||||
CAZyme Property |
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Genome Property |
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Gene Location | Start: 82008; End: 83117 Strand: + |
Family | Start | End | Evalue | family coverage |
---|---|---|---|---|
GT9 | 86 | 337 | 2.8e-52 | 0.9466666666666667 |
Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
---|---|---|---|---|---|---|---|
TIGR02201 | heptsyl_trn_III | 3.38e-92 | 13 | 326 | 1 | 307 | lipopolysaccharide heptosyltransferase III, putative. This family consists of examples of the putative ADP-heptose:LPS heptosyltransferase III, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria. This enzyme may be less widely distributed than heptosyltransferases I and II. [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides] |
PRK10422 | PRK10422 | 1.97e-81 | 8 | 369 | 2 | 350 | lipopolysaccharide core biosynthesis protein; Provisional |
cd03789 | GT9_LPS_heptosyltransferase | 3.80e-72 | 13 | 359 | 1 | 276 | lipopolysaccharide heptosyltransferase and similar proteins. Lipopolysaccharide heptosyltransferase (2.4.99.B6) is involved in the biosynthesis of lipooligosaccharide (LOS). Lipopolysaccharide (LPS) is a major component of the outer membrane of gram-negative bacteria. LPS heptosyltransferase transfers heptose molecules from ADP-heptose to 3-deoxy-D-manno-octulosonic acid (KDO), a part of the inner core component of LPS. This family also contains lipopolysaccharide 1,2-N-acetylglucosaminetransferase EC 2.4.1.56 and belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. |
COG0859 | RfaF | 1.88e-70 | 11 | 359 | 1 | 327 | ADP-heptose:LPS heptosyltransferase [Cell wall/membrane/envelope biogenesis]. |
pfam01075 | Glyco_transf_9 | 3.49e-40 | 85 | 337 | 2 | 241 | Glycosyltransferase family 9 (heptosyltransferase). Members of this family belong to glycosyltransferase family 9. Lipopolysaccharide is a major component of the outer leaflet of the outer membrane in Gram-negative bacteria. It is composed of three domains; lipid A, Core oligosaccharide and the O-antigen. All of these enzymes transfer heptose to the lipopolysaccharide core. |
Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
---|---|---|---|---|---|
QMT06311.1 | 1.89e-276 | 1 | 369 | 1 | 369 |
BBV84667.1 | 1.89e-276 | 1 | 369 | 1 | 369 |
AVH17867.1 | 1.05e-273 | 1 | 369 | 1 | 369 |
QBX84940.1 | 1.49e-273 | 1 | 369 | 1 | 369 |
QLN66530.1 | 6.05e-273 | 1 | 368 | 1 | 368 |
Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
---|---|---|---|---|---|---|
3TOV_A | 7.64e-19 | 12 | 366 | 9 | 349 | Thecrystal structure of the glycosyl transferase family 9 from Veillonella parvula DSM 2008 [Veillonella parvula DSM 2008],3TOV_B The crystal structure of the glycosyl transferase family 9 from Veillonella parvula DSM 2008 [Veillonella parvula DSM 2008] |
Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
---|---|---|---|---|---|---|
P25742 | 2.60e-59 | 19 | 326 | 1 | 297 | Lipopolysaccharide core heptosyltransferase RfaQ OS=Escherichia coli (strain K12) OX=83333 GN=rfaQ PE=3 SV=2 |
Q9R9D5 | 1.00e-57 | 19 | 326 | 1 | 297 | Lipopolysaccharide core heptosyltransferase RfaQ OS=Escherichia coli OX=562 GN=rfaQ PE=1 SV=1 |
Q57336 | 1.40e-17 | 11 | 316 | 8 | 292 | Lipopolysaccharide core heptosyltransferase OpsX OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) OX=71421 GN=opsX PE=3 SV=1 |
P45042 | 4.75e-06 | 14 | 362 | 3 | 344 | ADP-heptose--LPS heptosyltransferase 2 OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) OX=71421 GN=rfaF PE=3 SV=1 |
Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
---|---|---|---|---|---|
1.000077 | 0.000000 | 0.000000 | 0.000000 | 0.000000 | 0.000000 |
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