CAZyme Information: MGYG000000236_03359

Basic Information

• Species: Bacteroides fragilis_A
• Lineage: Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; Bacteroides fragilis_A
• CAZyme ID: MGYG000000236_03359
• CAZy Family: GH127
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
691	MGYG000000236_20|CGC1	78769.27	6.1552

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000000236	5355078	Isolate	China	Asia

• Gene Location: Start: 54668; End: 56743 Strand: -

Full Sequence      

MKTTTHLSVAAVLTVLMQMGCQSPATDTRQILHLPELDQVRIEDAFWSPKLETWRKITAN
DVLDKFEGKYTPFPGWDDTRDAFRNFDRVAEGQRDIKQHDGPEWYDGLVYESIRGIADFL
AGHPNKEMEKRIDGYIDRIYAAQQTEPTGYINTHTQLMENDHRWGDNGGLLRGQHDVYNA
GMLIEAGVHYYQATGKTRLLEIATRFANYMADYMGPEPRKNVVPAHSGPEEAVMALYWLY
KNEPELKDKLSIPVRESDYYDLVTFWIENRGHHCGYPLWGTWGYRKSEKWIKDACYHQTE
FGPHSRPCWGEYSQDSIPVLEQKTIEGHAVRATLMATGLAAAALENQSPQYIETAKRLWE
NMAGKRMFITGGVGAIHEDEKFGPDYFLPTDAYLETCAAVGAGFFSQRMNQLTCNARYMD
EVERVLYNNVLTGVSLSGDKYTYQNPLNTDKPDRWEWHVCPCCPPMFLKIMSAMPSYIYA
YQGDNIYVNLFIGSEVRIPIDKNNSVRLKQLTSYPWHGAVSIQVNPDKAGTFSIKVRIPG
WAQGTENPYGLYQSNLKAPVKLKVNQKDILLRIVDGYAEISREWKKGDHIELELPMQPRL
ITASEAVKDLRGQVALASGPVIYCFEDADNPELPTLTLQPQTPLELSHDNDLLHGVNIIK
CQSKIPAKAIPYYAVANRKESHSYKVWIPQE

Enzyme Prediction     

No EC number prediction in MGYG000000236_03359.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH127	40	624	2.6e-178	0.9980916030534351

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
pfam07944	Glyco_hydro_127	9.13e-161	39	624	1	503	Beta-L-arabinofuranosidase, GH127. One member of this family, from Bidobacterium longicum, UniProtKB:E8MGH8, has been characterized as an unusual beta-L-arabinofuranosidase enzyme, EC:3.2.1.185. It rleases l-arabinose from the l-arabinofuranose (Araf)-beta1,2-Araf disaccharide and also transglycosylates 1-alkanols with retention of the anomeric configuration. Terminal beta-l-arabinofuranosyl residues have been found in arabinogalactan proteins from a mumber of different plantt species. beta-l-Arabinofuranosyl linkages with 1-4 arabinofuranosides are also found in the sugar chains of extensin and solanaceous lectins, hydroxyproline (Hyp)2-rich glycoproteins that are widely observed in plant cell wall fractions. The critical residue for catalytic activity is Glu-338, in a ET/SCAS sequence context.
COG3533	COG3533	1.12e-117	50	691	5	588	Uncharacterized conserved protein, DUF1680 family [Function unknown].

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
QRM68955.1	0.0	1	691	1	691
QCQ52864.1	0.0	1	691	1	691
QTO26476.1	0.0	1	691	1	691
QCQ43901.1	0.0	1	691	1	691
QLK81200.1	0.0	1	691	1	691

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
4QJY_A	1.53e-109	40	691	16	648	Crystalstructure of native Ara127N, a GH127 beta-L-arabinofuranosidase from Geobacillus Stearothermophilus T6 [Geobacillus stearothermophilus],4QJY_B Crystal structure of native Ara127N, a GH127 beta-L-arabinofuranosidase from Geobacillus Stearothermophilus T6 [Geobacillus stearothermophilus]
6EX6_A	1.65e-108	40	689	15	624	TheGH127, Beta-arabinofuranosidase, BT3674 [Bacteroides thetaiotaomicron VPI-5482],6EX6_B The GH127, Beta-arabinofuranosidase, BT3674 [Bacteroides thetaiotaomicron VPI-5482]
4QK0_A	1.46e-105	40	691	16	648	Crystalstructure of Ara127N-Se, a GH127 beta-L-arabinofuranosidase from Geobacillus Stearothermophilus T6 [Geobacillus stearothermophilus],4QK0_B Crystal structure of Ara127N-Se, a GH127 beta-L-arabinofuranosidase from Geobacillus Stearothermophilus T6 [Geobacillus stearothermophilus],4QK0_C Crystal structure of Ara127N-Se, a GH127 beta-L-arabinofuranosidase from Geobacillus Stearothermophilus T6 [Geobacillus stearothermophilus],4QK0_D Crystal structure of Ara127N-Se, a GH127 beta-L-arabinofuranosidase from Geobacillus Stearothermophilus T6 [Geobacillus stearothermophilus]
3WRE_A	6.29e-72	88	631	58	573	Thecrystal structure of native HypBA1 from Bifidobacterium longum JCM 1217 [Bifidobacterium longum subsp. longum JCM 1217],3WRG_A The complex structure of HypBA1 with L-arabinose [Bifidobacterium longum subsp. longum JCM 1217]
3WKW_A	7.83e-72	88	631	58	573	Crystalstructure of GH127 beta-L-arabinofuranosidase HypBA1 from Bifidobacterium longum ligand free form [Bifidobacterium longum subsp. longum JCM 1217],3WKX_A Crystal structure of GH127 beta-L-arabinofuranosidase HypBA1 from Bifidobacterium longum arabinose complex form [Bifidobacterium longum subsp. longum JCM 1217],7BZL_A Chain A, Non-reducing end beta-L-arabinofuranosidase [Bifidobacterium longum subsp. longum JCM 1217],7DIF_A Chain A, Non-reducing end beta-L-arabinofuranosidase [Bifidobacterium longum subsp. longum JCM 1217],7EXV_A Chain A, Non-reducing end beta-L-arabinofuranosidase [Bifidobacterium longum subsp. longum JCM 1217],7EXW_A Chain A, Non-reducing end beta-L-arabinofuranosidase [Bifidobacterium longum subsp. longum JCM 1217]

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
E8MGH8	3.45e-71	88	631	58	573	Non-reducing end beta-L-arabinofuranosidase OS=Bifidobacterium longum subsp. longum (strain ATCC 15707 / DSM 20219 / JCM 1217 / NCTC 11818 / E194b) OX=565042 GN=hypBA1 PE=1 SV=1

SignalP and Lipop Annotations

This protein is predicted as LIPO

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.000000	0.000001	1.000055	0.000000	0.000000	0.000000

TMHMM  Annotations     

There is no transmembrane helices in MGYG000000236_03359.