CAZyme Information: MGYG000000236_04311

Basic Information

• Species: Bacteroides fragilis_A
• Lineage: Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; Bacteroides fragilis_A
• CAZyme ID: MGYG000000236_04311
• CAZy Family: CBM32
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
939	MGYG000000236_36|CGC1	103931.73	4.9985

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000000236	5355078	Isolate	China	Asia

• Gene Location: Start: 38025; End: 40844 Strand: -

Full Sequence      

MKKHLISMIFAAIMPLLLYACSAEEEKMVTSTTLEVAQSAIDFKSDAGTRDIAIVTDADN
WTARSDKDWCSVAVNGSTLTVNVSGYDGKETREAVIRVTADALTETVNVRQLGSDPAILI
SQQTFTVEASGSDIAFDVTTNVPVTITLPEWVKEKPADTRASEMVTTTHRYIVLANPEDG
ERTGNITVKEVGGELEALVSVTQKGLGEYESGDMEGIKDDIKVPVESGEASSFQGGSNID
KSFDGDMSTIYHSNWNNAGEHYFPITLTYNFPAGSDMDYFIYYPRTSGPNGNFKEVEIRV
KSNANTRGADEWNTLMTKNFGGTNAAVRINFPKAQIGVTSVQFIVKSGSGDGQGFAACAE
MEFYKKNPGAFDPLTLFTDVTCSELKPGLTDEEIENCPYSFYKNIAYYMKQGKYPTEFRI
QDYKAWPNPDDQSKTHKTSPYSLRDNPTGISVKDGEQLMVLVGDTHGQIISAVIQNLDVP
GGDGFGGTFYPLSEGANKITARNKGLMYILYHTPDYETAQPVKIHIASGQVNGYFDVAKH
QASDWNKLLSNAVDKYFDVVGHYAHLTFPTERFRAHTPDGKALIDAYDQIVNSEMELMGL
YKYNKLFKNRMYLHVMYTSYMYATSYHTAYNDGTLAELCNVDKLKTSSCWGPAHEIGHCN
QTRPGLKWLGTTEVTNNIMSEYIQTTIFGQPSRLQTENMGDGSRNRYSKAWTQIIAAGAP
HGNFGSDSDVFCKLVPFWQLELYFGKVLGQTPLQQADKGGFYPDVYEYIRTHDNLKTAGE
QQTEFVYICSLIAKANLLDFFTKWGFLTPIDVTLDDYGVGKLTVTQSRIDEIKKRVEALG
YPKPDVALEYITDNSVELYKTKPGIISGTATRSGSTFTMTNWKNVVAYEVVDETGKKVCI
SDGVLAPSNTATFTMKTAWKDGFKVYAVSATGDKTVVTF

Enzyme Prediction     

No EC number prediction in MGYG000000236_04311.

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
pfam13402	Peptidase_M60	7.64e-77	529	805	1	268	Peptidase M60, enhancin and enhancin-like. This family of peptidases contains a zinc metallopeptidase motif (HEXXHX(8,28)E) and possesses mucinase activity. It includes the viral enhancins as well as enhancin-like peptidases from bacterial species. Enhancins are a class of metalloproteases found in some baculoviruses that enhance viral infection by degrading the peritrophic membrane (PM) of the insect midgut. Bacterial enhancins are found to be cytotoxic when compared to viral enhancin, however, suggesting that the bacterial enhancins do not enhance infection in the same way as viral enhancin. Bacterial enhancins may have evolved a distinct biochemical function. These bacterial domains are peptidases targetting host glycoproteins and thus probably play an important role in successful colonisation of both vertebrate mucosal surfaces and the invertebrate digestive tract by both mutualistic and pathogenic microbes. This family has been augmented by a merge with the sequences in the Enhancin Pfam family.
cd14948	BACON	6.92e-16	33	111	1	82	Bacteroidetes-Associated Carbohydrate-binding (putative) Often N-terminal (BACON) domain. The BACON domain is found in diverse domain architectures and accociated with a wide variety of domains, including carbohydrate-active enzymes and proteases. It was named for its suggested function of carbohydrate binding; the latter was inferred from domain architectures, sequence conservation, and phyletic distribution. However, recent experimental data suggest that its primary function in Bacteroides ovatus endo-xyloglucanase BoGH5A is to distance the catalytic module from the cell surface and confer additional mobility to the catalytic domain for attack of the polysaccharide. No evidence for a direct role in carbohydrate binding could be found in that case. The large majority of BACON domains are found in Bacteroidetes.
pfam17291	M60-like_N	4.65e-14	438	525	14	107	N-terminal domain of M60-like peptidases. This accessory domain has a jelly roll topology.
cd14948	BACON	3.86e-11	117	204	1	83	Bacteroidetes-Associated Carbohydrate-binding (putative) Often N-terminal (BACON) domain. The BACON domain is found in diverse domain architectures and accociated with a wide variety of domains, including carbohydrate-active enzymes and proteases. It was named for its suggested function of carbohydrate binding; the latter was inferred from domain architectures, sequence conservation, and phyletic distribution. However, recent experimental data suggest that its primary function in Bacteroides ovatus endo-xyloglucanase BoGH5A is to distance the catalytic module from the cell surface and confer additional mobility to the catalytic domain for attack of the polysaccharide. No evidence for a direct role in carbohydrate binding could be found in that case. The large majority of BACON domains are found in Bacteroidetes.
pfam18630	Peptidase_M60_C	1.69e-07	869	932	3	61	Peptidase M60 C-terminal domain. This is C-terminal domain (CTD) of M60-peptidases pfam13402. It Can also be found at the C-terminal region of gingipain B (RgpB) from P. gingivalis. It was found to possess a typical Ig-like fold encompassing seven antiparallel beta-strands organized in two beta-sheets, packed into a beta-sandwich structure that can spontaneously dimerize through C-terminal strand swapping. Translocation of gingipains from the periplasm across the OM is dependent on the conserved CTD, which appears to be important for secretion of the proteins and in particular, truncation of the last few C-terminal residues of this domain leads to accumulation of gingipains in the periplasm. Subsequently, the T9SS targeting signal was demonstrated to reside within the last 22 residues at the C-terminus of the CTD. During gingipain translocation across the OM, the CTD is cleaved off by PorU.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
QRM71921.1	0.0	1	939	1	939
QTO25368.1	0.0	1	939	1	939
QCT79445.1	0.0	1	939	1	939
QRP89238.1	0.0	1	939	1	939
QUU03487.1	0.0	1	939	1	939

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
7SCI_A	5.26e-74	374	853	12	487	ChainA, Peptidase M60 domain-containing protein [Akkermansia muciniphila ATCC BAA-835]
5KD2_A	4.29e-63	374	853	32	507	BT_4244metallopeptidase from Bacteroides thetaiotaomicron [Bacteroides thetaiotaomicron VPI-5482]
5KD5_A	8.63e-56	408	853	20	459	BT_4244metallopeptidase from Bacteroides thetaiotaomicron [Bacteroides thetaiotaomicron VPI-5482],5KD8_A BT_4244 metallopeptidase in complex with Tn antigen. [Bacteroides thetaiotaomicron VPI-5482]
7BLG_A	1.94e-46	211	366	12	162	ChainA, family 32 carbohydrate-binding module from Bacteroides thetaiotaomicron [Bacteroides thetaiotaomicron VPI-5482],7BLH_AAAA Chain AAAA, family 32 carbohydrate-binding module from Bacteroides thetaiotaomicron [Bacteroides thetaiotaomicron VPI-5482],7BLJ_A Chain A, family 32 carbohydrate-binding module from Bacteroides thetaiotaomicron [Bacteroides thetaiotaomicron VPI-5482],7BLK_A Chain A, family 32 carbohydrate-binding module from Bacteroides thetaiotaomicron [Bacteroides thetaiotaomicron VPI-5482]
5EV7_A	1.76e-39	439	864	41	424	Thecrystal structure of a functionally unknown conserved protein mutant from Bacillus anthracis str. Ames [Bacillus anthracis str. Ames]

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
Q6P6V7	9.99e-07	490	806	588	881	TRPM8 channel-associated factor 3 OS=Rattus norvegicus OX=10116 GN=Tcaf3 PE=2 SV=1

SignalP and Lipop Annotations

This protein is predicted as LIPO

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.000000	0.000001	1.000040	0.000000	0.000000	0.000000

TMHMM  Annotations     

There is no transmembrane helices in MGYG000000236_04311.