CAZyme Information: MGYG000000238_01537

Basic Information

• Species: Enterococcus_D casseliflavus
• Lineage: Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus_D; Enterococcus_D casseliflavus
• CAZyme ID: MGYG000000238_01537
• CAZy Family: GH105
• CAZyme Description: Unsaturated rhamnogalacturonyl hydrolase YteR

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
373	MGYG000000238_6|CGC4	43028.16	4.95

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000000238	3499694	Isolate	China	Asia

• Gene Location: Start: 122176; End: 123297 Strand: -

Full Sequence      

MKNYSEIALNTLFERYDYLCKEKIYHGKWSYDIGVVLQGVKGAYEQTGDKRYFDYIQNTM
DFYIDEDGCIKNYQMDAMNIDYINNGKCLFLVYKETGASKYKIALDTLYQQLQQMPRTSE
GGFWHKKIYPYQMWLDGLYMGAPFLTEYALTFEKEEALEDVIKQFTLCFTHTLDPKTGLL
YHAWDEQKVQPWADPETGCSKNFWGRSMGWFMMALADTMVLLGKSEQKNPLEKMFVSCLE
ALAKVRDPQKKVWYQVLDKGSEHGNYLEASASSMICYATAKAVKAGIIDQKWQVFAQETY
QGLLDEFVFLTKEGWLNLIRNCEVAGLGGPDNRDGTFVYYISEPVITNDFKGYGAFLQAS
LLLQPLTEEGSKK

Enzyme Prediction     

No EC number prediction in MGYG000000238_01537.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH105	25	361	2.6e-106	0.9608433734939759

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
COG4225	YesR	1.14e-105	1	366	8	356	Rhamnogalacturonyl hydrolase YesR [Carbohydrate transport and metabolism].
pfam07470	Glyco_hydro_88	3.69e-95	28	361	26	337	Glycosyl Hydrolase Family 88. Unsaturated glucuronyl hydrolase catalyzes the hydrolytic release of unsaturated glucuronic acids from oligosaccharides (EC:3.2.1.-) produced by the reactions of polysaccharide lyases.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
QOG31227.1	1.91e-287	1	373	1	373
QGN29886.1	2.40e-281	1	373	1	373
EEV39837.2	1.14e-279	1	373	1	373
ATF73249.1	1.10e-277	1	373	1	373
AMG50372.1	2.58e-276	1	373	1	373

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
4WU0_A	2.90e-126	1	360	1	355	StructuralAnalysis of C. acetobutylicum ATCC 824 Glycoside Hydrolase From Family 105 [Clostridium acetobutylicum ATCC 824],4WU0_B Structural Analysis of C. acetobutylicum ATCC 824 Glycoside Hydrolase From Family 105 [Clostridium acetobutylicum ATCC 824]
1NC5_A	2.17e-83	4	372	16	373	Structureof Protein of Unknown Function of YteR from Bacillus Subtilis [Bacillus subtilis],2D8L_A Crystal Structure of Unsaturated Rhamnogalacturonyl Hydrolase in complex with dGlcA-GalNAc [Bacillus subtilis]
2GH4_A	9.04e-83	4	372	6	363	ChainA, Putative glycosyl hydrolase yteR [Bacillus subtilis]
3QWT_A	1.45e-15	29	304	65	329	ChainA, Putative GH105 family protein [Salmonella enterica subsp. enterica serovar Paratyphi A],3QWT_B Chain B, Putative GH105 family protein [Salmonella enterica subsp. enterica serovar Paratyphi A],3QWT_C Chain C, Putative GH105 family protein [Salmonella enterica subsp. enterica serovar Paratyphi A],3QWT_D Chain D, Putative GH105 family protein [Salmonella enterica subsp. enterica serovar Paratyphi A]
3PMM_A	2.65e-15	29	304	66	330	ChainA, Putative cytoplasmic protein [Klebsiella pneumoniae subsp. pneumoniae MGH 78578]

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
O34559	1.19e-82	4	372	16	373	Unsaturated rhamnogalacturonyl hydrolase YteR OS=Bacillus subtilis (strain 168) OX=224308 GN=yteR PE=1 SV=1
P0A3U6	5.60e-38	140	363	1	231	Protein Atu3128 OS=Agrobacterium fabrum (strain C58 / ATCC 33970) OX=176299 GN=Atu3128 PE=3 SV=1
P0A3U7	5.60e-38	140	363	1	231	24.9 kDa protein in picA locus OS=Rhizobium radiobacter OX=358 PE=2 SV=1

SignalP and Lipop Annotations

This protein is predicted as OTHER

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
1.000064	0.000000	0.000000	0.000000	0.000000	0.000000

TMHMM  Annotations     

There is no transmembrane helices in MGYG000000238_01537.