CAZyme Information: MGYG000000239_00236

Basic Information

• Species: Collinsella sp003471585
• Lineage: Bacteria; Actinobacteriota; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; Collinsella sp003471585
• CAZyme ID: MGYG000000239_00236
• CAZy Family: GH106
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
863	MGYG000000239_1|CGC2	93694.78	4.6287

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000000239	2298700	Isolate	China	Asia

• Gene Location: Start: 280821; End: 283412 Strand: +

Full Sequence      

MTAHYQQVLEGTYDNHVLPFLWMKGESHKTIAEYLEKIAGADIHEVCLESRPHPDFCGEG
WWRNLRFVIDECRQLGLKLWILDDAHFPTGFANGAVKEAVPELRKIVLTHRTFDIVGPTS
AASIALANMLDKTERFYGVTFMQDGSPVDVAYRVIDDADGNPSRLVFDAPAGLTQACVMF
TSGKTSYNEDYINMVDRASVAQLIDAVYEPHFEHLGDEFGKTILGFFSDEPGFANEKGTT
GPDGISDTLIGKATAPLPWSAELERRLRAALGERYLAELPHLWDREPAGAHVRHVYMDIA
STLYKECFCDQLGDWCRARGVQYIGHVIEDKDCHARLGVGAGHYFRAVGGQDMAGVDIVI
NQLVPGMDRGLHSYGRGVWDLEFYNYVLPKLGSSAAHLDPKKQGRCMAEVFGAFGWHEGL
REMKWIADHFLVRGVNWFVPHAFSMAAFPDWDCPPHFYAHGQNPQFAHFGQLMSYMNRTA
SLLSGGRATTPVALLYHADAEWAGEANFMQHAASKLMRAQVDFDIVPAEAFEDAGRYAVE
IAADGSGFSVNGQAYRCLVMPGAEFVGEAVLDFAVRAAAAGVAVYALDELPNKRYDGDTA
GREGFASLDAAAVAGIKLLATTELADTLANTGMQTVVCAEPQPWLRALRYERAGETYLML
VNEHPKQGISTQIALADGTPVAGARLDLLNGTEPAAFDGTLELAPYESCIVVLGATGSVA
VATAEDEATCVDGPWAVAFSAPGTDAFGESVELADLHDLSSAEFPGKAGTFRYQASFVLG
EAASRAVIDLGEVFETATVTLDGKSLGTRICPPYRFEAAALLASEHALTIDIINTLDHAV
PDVFGMTEPSEPSGLLGPVRVLG

Enzyme Prediction     

No EC number prediction in MGYG000000239_00236.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH106	28	861	7.2e-69	0.9635922330097088

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
pfam17132	Glyco_hydro_106	0.009	393	563	566	732	alpha-L-rhamnosidase.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
AZH68834.1	0.0	1	863	1	863
ATP54541.1	0.0	13	863	4	850
QNM10672.1	1.64e-314	1	861	1	832
AGF57028.1	3.18e-250	8	862	7	846
ANY67834.1	6.34e-208	6	859	6	875

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
6Q2F_A	1.74e-07	664	862	932	1139	Structureof Rhamnosidase from Novosphingobium sp. PP1Y [Novosphingobium sp. PP1Y]

Swiss-Prot Hits     

has no Swissprot hit.

SignalP and Lipop Annotations

This protein is predicted as OTHER

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
1.000062	0.000000	0.000000	0.000000	0.000000	0.000000

TMHMM  Annotations     

There is no transmembrane helices in MGYG000000239_00236.