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CAZyme Information: MGYG000000240_00755

You are here: Home > Sequence: MGYG000000240_00755

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Amedibacterium intestinale
Lineage Bacteria; Firmicutes; Bacilli; Erysipelotrichales; Erysipelotrichaceae; Amedibacterium; Amedibacterium intestinale
CAZyme ID MGYG000000240_00755
CAZy Family GH23
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
335 36496.13 7.1429
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000240 2625986 Isolate China Asia
Gene Location Start: 51632;  End: 52639  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000000240_00755.

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam13702 Lysozyme_like 2.71e-62 48 204 1 165
Lysozyme-like.
cd16891 CwlT-like 5.47e-54 54 204 1 150
CwlT-like N-terminal lysozyme domain and similar domains. CwlT is a bifunctional cell wall hydrolase containing an N-terminal lysozyme domain and a C-terminal NlpC/P60 endopeptidase domain (gamma-d-D-glutamyl-L-diamino acid endopeptidase), and has been implicated in the spread of transposons. Proteins similar to this family include the soluble and insoluble membrane-bound LTs in bacteria, the LTs in bacteriophage lambda, as well as the eukaryotic "goose-type" lysozymes (goose egg-white lysozyme; GEWL).
pfam00877 NLPC_P60 3.36e-34 226 332 1 105
NlpC/P60 family. The function of this domain is unknown. It is found in several lipoproteins.
PRK13914 PRK13914 7.21e-31 214 333 366 481
invasion associated endopeptidase.
COG0791 Spr 1.58e-24 214 330 75 196
Cell wall-associated hydrolase, NlpC family [Cell wall/membrane/envelope biogenesis].

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QFX79249.1 6.77e-246 1 335 1 335
AQP39780.1 6.77e-246 1 335 1 335
AUA26131.1 6.77e-246 1 335 1 335
AXU86967.1 6.77e-246 1 335 1 335
AXU65920.1 6.77e-246 1 335 1 335

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
4HPE_A 3.75e-215 29 335 2 308
ChainA, Putative cell wall hydrolase Tn916-like,CTn1-Orf17 [Clostridioides difficile 630],4HPE_B Chain B, Putative cell wall hydrolase Tn916-like,CTn1-Orf17 [Clostridioides difficile 630],4HPE_C Chain C, Putative cell wall hydrolase Tn916-like,CTn1-Orf17 [Clostridioides difficile 630],4HPE_D Chain D, Putative cell wall hydrolase Tn916-like,CTn1-Orf17 [Clostridioides difficile 630],4HPE_E Chain E, Putative cell wall hydrolase Tn916-like,CTn1-Orf17 [Clostridioides difficile 630],4HPE_F Chain F, Putative cell wall hydrolase Tn916-like,CTn1-Orf17 [Clostridioides difficile 630]
4FDY_A 4.66e-138 30 333 5 310
ChainA, Similar to lipoprotein, NLP/P60 family [Staphylococcus aureus subsp. aureus Mu50],4FDY_B Chain B, Similar to lipoprotein, NLP/P60 family [Staphylococcus aureus subsp. aureus Mu50]
7CFL_A 3.27e-15 214 333 14 137
ChainA, Putative cell wall hydrolase phosphatase-associated protein [Clostridioides difficile],7CFL_B Chain B, Putative cell wall hydrolase phosphatase-associated protein [Clostridioides difficile],7CFL_C Chain C, Putative cell wall hydrolase phosphatase-associated protein [Clostridioides difficile],7CFL_D Chain D, Putative cell wall hydrolase phosphatase-associated protein [Clostridioides difficile]
2EVR_A 1.64e-11 229 333 126 237
ChainA, COG0791: Cell wall-associated hydrolases (invasion-associated proteins) [Nostoc punctiforme PCC 73102],2FG0_A Chain A, COG0791: Cell wall-associated hydrolases (invasion-associated proteins) [Nostoc punctiforme PCC 73102],2FG0_B Chain B, COG0791: Cell wall-associated hydrolases (invasion-associated proteins) [Nostoc punctiforme PCC 73102]
6BIQ_A 1.70e-11 211 320 155 264
Structureof NlpC2 from Trichomonas vaginalis [Trichomonas vaginalis],6BIQ_B Structure of NlpC2 from Trichomonas vaginalis [Trichomonas vaginalis],6BIQ_C Structure of NlpC2 from Trichomonas vaginalis [Trichomonas vaginalis],6BIQ_D Structure of NlpC2 from Trichomonas vaginalis [Trichomonas vaginalis]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
P96645 4.21e-73 14 334 15 329
Probable endopeptidase YddH OS=Bacillus subtilis (strain 168) OX=224308 GN=yddH PE=3 SV=1
P21171 2.42e-23 217 333 372 484
Probable endopeptidase p60 OS=Listeria monocytogenes serovar 1/2a (strain ATCC BAA-679 / EGD-e) OX=169963 GN=iap PE=1 SV=2
Q01839 1.36e-22 220 333 415 524
Probable endopeptidase p60 OS=Listeria welshimeri OX=1643 GN=iap PE=3 SV=1
Q01836 4.75e-22 220 333 358 467
Probable endopeptidase p60 OS=Listeria innocua serovar 6a (strain ATCC BAA-680 / CLIP 11262) OX=272626 GN=iap PE=3 SV=2
O34636 9.01e-22 54 214 55 214
Uncharacterized membrane protein YocA OS=Bacillus subtilis (strain 168) OX=224308 GN=yocA PE=4 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.446859 0.547955 0.004004 0.000311 0.000265 0.000593

TMHMM  Annotations      download full data without filtering help

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