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CAZyme Information: MGYG000000240_01323

You are here: Home > Sequence: MGYG000000240_01323

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Amedibacterium intestinale
Lineage Bacteria; Firmicutes; Bacilli; Erysipelotrichales; Erysipelotrichaceae; Amedibacterium; Amedibacterium intestinale
CAZyme ID MGYG000000240_01323
CAZy Family GH170
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
364 MGYG000000240_20|CGC1 42302.27 6.5046
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000240 2625986 Isolate China Asia
Gene Location Start: 3079;  End: 4173  Strand: -

Full Sequence      Download help

MRRLGISIYP  EKSDKETILN  YIDKTSKAGF  SRIFSCLLSV  EKSKEEIIKD  FKEINTYAKS60
KGFEIIVDVS  PRVFNQLGIS  YQDLTFFKDI  GADGLRLDMG  FTGNEEAIMT  FNPYDLKIEI120
NMSNDVHTID  TIMDYKPNRY  NLYACHNFYP  HGYTGLGLEF  FENCTKRFSK  YGLRTAAFVT180
SQNKDTFGSW  PVTEGLPTLE  MHRHLPMDVQ  IKHFIAMDSI  DDILISNCYP  TDEEIDKVKG240
LDLSLLTLDV  ELYKDTPEIE  QKILFEELHF  NRGDQNENMI  RSTQSRVKYK  GHHFALFHAP300
EIIRRGDVII  ESSEYGHYAG  ELQIALHDMK  NSGKTNVVGH  IRKEEHFLLD  YIKPWQKFRL360
RKVK364

Enzyme Prediction      help

No EC number prediction in MGYG000000240_01323.

CAZyme Signature Domains help

Created with Snap18365472911091271451631822002182362542732913093273453360GH170
Family Start End Evalue family coverage
GH170 3 360 9.8e-124 0.9942857142857143

CDD Domains      download full data without filtering help

Created with Snap18365472911091271451631822002182362542732913093273451364COG35894239DUF871_N246361DUF871
Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG3589 COG3589 1.68e-130 1 364 1 360
Uncharacterized protein [Function unknown].
pfam19200 DUF871_N 6.55e-123 4 239 1 234
DUF871 N-terminal domain. This family consists of several conserved hypothetical proteins from bacteria and archaea. The function of this family is unknown.
pfam05913 DUF871 3.48e-49 246 361 1 116
Bacterial protein of unknown function (DUF871). This family consists of several conserved hypothetical proteins from bacteria and archaea. The function of this family is unknown.

CAZyme Hits      help

Created with Snap18365472911091271451631822002182362542732913093273451364BBK63008.1|GH1701364BBK23266.1|GH1701364ASW42349.1|GH1701364QTU83257.1|GH1701358BBM45080.1|GH170
Hit ID E-Value Query Start Query End Hit Start Hit End
BBK63008.1 2.88e-273 1 364 1 364
BBK23266.1 1.67e-272 1 364 1 364
ASW42349.1 4.77e-194 1 364 1 364
QTU83257.1 2.34e-192 1 364 1 364
BBM45080.1 1.25e-191 1 358 1 358

PDB Hits      download full data without filtering help

Created with Snap183654729110912714516318220021823625427329130932734523581X7F_A53602P0O_A
Hit ID E-Value Query Start Query End Hit Start Hit End Description
1X7F_A 3.74e-120 2 358 27 381
Crystalstructure of an uncharacterized B. cereus protein [Bacillus cereus ATCC 14579]
2P0O_A 2.67e-29 5 360 6 357
Crystalstructure of a conserved protein from locus EF_2437 in Enterococcus faecalis with an unknown function [Enterococcus faecalis V583]

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000059 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000000240_01323.