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CAZyme Information: MGYG000000240_01665

You are here: Home > Sequence: MGYG000000240_01665

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Amedibacterium intestinale
Lineage Bacteria; Firmicutes; Bacilli; Erysipelotrichales; Erysipelotrichaceae; Amedibacterium; Amedibacterium intestinale
CAZyme ID MGYG000000240_01665
CAZy Family GH3
CAZyme Description Beta-glucosidase BoGH3B
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
797 MGYG000000240_30|CGC1 87900 4.7722
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000240 2625986 Isolate China Asia
Gene Location Start: 21934;  End: 24327  Strand: +

Full Sequence      Download help

MKEPSQRVKD  ILANMSIEQK  AAQLSCVIPS  LVLEKGEFKE  ERALKEMPFG  VGRMTQFASG60
FTQGPVQAAT  GYNAIQKYMI  EKTGLPAIIQ  NESSSGTVAA  QGTIFPVPIA  LASSFEPKLS120
YEMGKVIADE  GKAIGVHAMM  SPVADVSRDA  RWGRVDETFG  EDPLVCARFT  SEEVRGIQGE180
DYTSRCAALA  KHWVGYGASE  GGINCATINI  GKKELFEVYA  TPFAAAIKEN  DMQSIMVTYS240
EIDGRPMSVN  EEYTQKVLRE  DLGFNGIAVC  DGMSIPRVFE  TQGMFASREE  LAAAALKAGI300
DADTMFTTVY  NHISEGVKKG  CINEEDLDAA  VLRTLQFREE  MGLLDNPYVD  PQKAQEVYDD360
PKADKLSEEI  AQKAITLLKN  DGILPLKNTY  KKIAVIGPFA  NKLSSFFGGY  AYPAMMGSFL420
EMCVDPSVAV  KMEGFQEIAE  KMFDIESMKQ  KMYKDPSKSF  AENFDNYLKE  ELGTQSLTEA480
LQQECKDITF  VSYGESLNTE  NYKACIEKAL  EVAKDADAVI  LALGEVTGQG  KDATSGEGVN540
NPDLSLPFHQ  QELVEAIHSI  HKPSVLVLFN  GRPLALGETE  PLVNAIVEAW  YPGPSGGKPV600
AKVLSGAFNP  QGHLPVTFPR  MSAQCPIYYG  HKTGSGYMNI  HQEPDASVMQ  PLYPFGYGLS660
YTTFKISNLK  HEKEVEIGDS  FKVSIDITNT  GTIAGSDVVQ  VYTHSMAPTI  NRPIKELRGF720
KNVYLNPKET  KTIEFEFDTH  QFGYYNALEQ  FVIENRPQEI  FVGDNSSVIQ  EKGRIEFKGK780
TKEILHERVF  DFKVVEK797

Enzyme Prediction      help

EC 3.2.1.21 3.2.1.- 3.2.1.37

CAZyme Signature Domains help

Created with Snap397911915919923927831835839843847851855759763767771775780303GH3
Family Start End Evalue family coverage
GH3 80 303 2e-58 0.9722222222222222

CDD Domains      download full data without filtering help

Created with Snap397911915919923927831835839843847851855759763767771775797771PRK1509894738PLN0308015412BglX16335Glyco_hydro_3375661Glyco_hydro_3_C
Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
PRK15098 PRK15098 6.42e-125 97 771 112 759
beta-glucosidase BglX.
PLN03080 PLN03080 6.24e-68 94 738 104 743
Probable beta-xylosidase; Provisional
COG1472 BglX 8.78e-68 15 412 1 373
Periplasmic beta-glucosidase and related glycosidases [Carbohydrate transport and metabolism].
pfam00933 Glyco_hydro_3 1.24e-52 16 335 1 314
Glycosyl hydrolase family 3 N terminal domain.
pfam01915 Glyco_hydro_3_C 3.89e-49 375 661 1 216
Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933.

CAZyme Hits      help

Created with Snap39791191591992392783183583984384785185575976376777177571797BBK62628.1|GH31797BBK22860.1|GH37783ADL43374.1|GH37794AFM44649.1|GH3|3.2.1.377783ADQ05594.1|GH3
Hit ID E-Value Query Start Query End Hit Start Hit End
BBK62628.1 0.0 1 797 1 797
BBK22860.1 0.0 1 797 1 797
ADL43374.1 5.69e-175 7 783 6 757
AFM44649.1 7.77e-174 7 794 21 786
ADQ05594.1 1.26e-173 7 783 6 757

PDB Hits      download full data without filtering help

Created with Snap397911915919923927831835839843847851855759763767771775747715Z87_A117665XXL_A117665XXN_A67664ZOA_A67664ZO6_A
Hit ID E-Value Query Start Query End Hit Start Hit End Description
5Z87_A 7.50e-107 4 771 43 779
ChainA, EmGH1 [Aurantiacibacter marinus],5Z87_B Chain B, EmGH1 [Aurantiacibacter marinus]
5XXL_A 2.59e-102 11 766 17 741
Crystalstructure of GH3 beta-glucosidase from Bacteroides thetaiotaomicron [Bacteroides thetaiotaomicron VPI-5482],5XXL_B Crystal structure of GH3 beta-glucosidase from Bacteroides thetaiotaomicron [Bacteroides thetaiotaomicron VPI-5482],5XXM_A Crystal structure of GH3 beta-glucosidase from Bacteroides thetaiotaomicron in complex with gluconolactone [Bacteroides thetaiotaomicron VPI-5482],5XXM_B Crystal structure of GH3 beta-glucosidase from Bacteroides thetaiotaomicron in complex with gluconolactone [Bacteroides thetaiotaomicron VPI-5482]
5XXN_A 1.37e-101 11 766 17 741
CrystalStructure of mutant (D286N) beta-glucosidase from Bacteroides thetaiotaomicron in complex with sophorose [Bacteroides thetaiotaomicron VPI-5482],5XXN_B Crystal Structure of mutant (D286N) beta-glucosidase from Bacteroides thetaiotaomicron in complex with sophorose [Bacteroides thetaiotaomicron VPI-5482],5XXO_A Crystal structure of mutant (D286N) GH3 beta-glucosidase from Bacteroides thetaiotaomicron in complex with sophorotriose [Bacteroides thetaiotaomicron VPI-5482],5XXO_B Crystal structure of mutant (D286N) GH3 beta-glucosidase from Bacteroides thetaiotaomicron in complex with sophorotriose [Bacteroides thetaiotaomicron VPI-5482]
4ZOA_A 5.15e-101 6 766 4 709
CrystalStructure of beta-glucosidase from Listeria innocua in complex with isofagomine [Listeria innocua Clip11262],4ZOA_B Crystal Structure of beta-glucosidase from Listeria innocua in complex with isofagomine [Listeria innocua Clip11262],4ZOB_A Crystal Structure of beta-glucosidase from Listeria innocua in complex with gluconolactone [Listeria innocua Clip11262],4ZOB_B Crystal Structure of beta-glucosidase from Listeria innocua in complex with gluconolactone [Listeria innocua Clip11262],4ZOD_A Crystal Structure of beta-glucosidase from Listeria innocua in complex with glucose [Listeria innocua Clip11262],4ZOD_B Crystal Structure of beta-glucosidase from Listeria innocua in complex with glucose [Listeria innocua Clip11262],4ZOE_A Crystal Structure of beta-glucosidase from Listeria innocua [Listeria innocua Clip11262],4ZOE_B Crystal Structure of beta-glucosidase from Listeria innocua [Listeria innocua Clip11262]
4ZO6_A 7.45e-100 6 766 4 709
CrystalStructure of mutant (D270A) beta-glucosidase from Listeria innocua in complex with cellobiose [Listeria innocua Clip11262],4ZO6_B Crystal Structure of mutant (D270A) beta-glucosidase from Listeria innocua in complex with cellobiose [Listeria innocua Clip11262],4ZO7_A Crystal structure of mutant (D270A) beta-glucosidase from Listeria innocua in complex with gentiobiose [Listeria innocua Clip11262],4ZO7_B Crystal structure of mutant (D270A) beta-glucosidase from Listeria innocua in complex with gentiobiose [Listeria innocua Clip11262],4ZO8_A Crystal Structure of mutant (D270A) beta-glucosidase from Listeria innocua in complex with sophorose [Listeria innocua Clip11262],4ZO8_B Crystal Structure of mutant (D270A) beta-glucosidase from Listeria innocua in complex with sophorose [Listeria innocua Clip11262],4ZO9_A Crystal Structure of mutant (D270A) beta-glucosidase from Listeria innocua in complex with laminaribiose [Listeria innocua Clip11262],4ZO9_B Crystal Structure of mutant (D270A) beta-glucosidase from Listeria innocua in complex with laminaribiose [Listeria innocua Clip11262],4ZOC_A Crystal Structure of mutant (D270A) beta-glucosidase from Listeria innocua in complex with sophorotriose [Listeria innocua Clip11262],4ZOC_B Crystal Structure of mutant (D270A) beta-glucosidase from Listeria innocua in complex with sophorotriose [Listeria innocua Clip11262]

Swiss-Prot Hits      download full data without filtering help

Created with Snap39791191591992392783183583984384785185575976376777177576778sp|T2KMH9|PLH34_FORAG8771sp|Q56078|BGLX_SALTY8776sp|P33363|BGLX_ECOLI81766sp|T2KMH0|PLH24_FORAG8764sp|A7LXU3|BGH3B_BACO1
Hit ID E-Value Query Start Query End Hit Start Hit End Description
T2KMH9 7.09e-100 6 778 38 755
Putative beta-xylosidase OS=Formosa agariphila (strain DSM 15362 / KCTC 12365 / LMG 23005 / KMM 3901 / M-2Alg 35-1) OX=1347342 GN=BN863_22230 PE=2 SV=1
Q56078 4.62e-99 8 771 38 759
Periplasmic beta-glucosidase OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) OX=99287 GN=bglX PE=3 SV=2
P33363 3.50e-97 8 776 38 763
Periplasmic beta-glucosidase OS=Escherichia coli (strain K12) OX=83333 GN=bglX PE=3 SV=2
T2KMH0 1.14e-90 81 766 61 710
Beta-xylosidase OS=Formosa agariphila (strain DSM 15362 / KCTC 12365 / LMG 23005 / KMM 3901 / M-2Alg 35-1) OX=1347342 GN=BN863_22130 PE=1 SV=1
A7LXU3 5.85e-82 8 764 39 763
Beta-glucosidase BoGH3B OS=Bacteroides ovatus (strain ATCC 8483 / DSM 1896 / JCM 5824 / BCRC 10623 / CCUG 4943 / NCTC 11153) OX=411476 GN=BACOVA_02659 PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000069 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000000240_01665.