Species | Roseburia sp003470905 | |||||||||||
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Lineage | Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; Roseburia; Roseburia sp003470905 | |||||||||||
CAZyme ID | MGYG000000245_01914 | |||||||||||
CAZy Family | CBM61 | |||||||||||
CAZyme Description | hypothetical protein | |||||||||||
CAZyme Property |
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Genome Property |
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Gene Location | Start: 76296; End: 78149 Strand: + |
Family | Start | End | Evalue | family coverage |
---|---|---|---|---|
GH53 | 300 | 601 | 2e-105 | 0.8596491228070176 |
CBM61 | 58 | 198 | 1.4e-20 | 0.9858156028368794 |
Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
---|---|---|---|---|---|---|---|
COG3867 | GanB | 1.02e-111 | 279 | 605 | 19 | 338 | Arabinogalactan endo-1,4-beta-galactosidase [Carbohydrate transport and metabolism]. |
pfam07745 | Glyco_hydro_53 | 1.76e-109 | 300 | 601 | 1 | 288 | Glycosyl hydrolase family 53. This domain belongs to family 53 of the glycosyl hydrolase classification. These enzymes are enzymes are endo-1,4- beta-galactanases (EC:3.2.1.89). The structure of this domain is known and has a TIM barrel fold. |
pfam00150 | Cellulase | 4.48e-05 | 321 | 397 | 19 | 95 | Cellulase (glycosyl hydrolase family 5). |
pfam07554 | FIVAR | 7.68e-05 | 213 | 275 | 1 | 69 | FIVAR domain. This domain is found in a wide variety of contexts, but mostly occurring in cell wall associated proteins. A lack of conserved catalytic residues suggests that it is a binding domain. From context, possible substrates are hyaluronate or fibronectin (personal obs: C Yeats). This is further evidenced by. Possibly the exact substrate is N-acetyl glucosamine. Finding it in the same protein as pfam05089 further supports this proposal. It is found in the C-terminal part of Bacillus sp. Gellan lyase, which is removed during maturation. Some of the proteins it is found in are involved in methicillin resistance. The name FIVAR derives from Found In Various Architectures. |
COG2730 | BglC | 8.38e-04 | 295 | 388 | 47 | 137 | Aryl-phospho-beta-D-glucosidase BglC, GH1 family [Carbohydrate transport and metabolism]. |
Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
---|---|---|---|---|---|
VCV24089.1 | 0.0 | 1 | 617 | 1 | 617 |
CBL10224.1 | 0.0 | 1 | 617 | 1 | 618 |
QNM03783.1 | 3.60e-156 | 90 | 594 | 255 | 760 |
CBK73963.1 | 6.94e-145 | 49 | 605 | 35 | 529 |
SQI62631.1 | 7.42e-125 | 101 | 605 | 81 | 505 |
Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
---|---|---|---|---|---|---|
1R8L_A | 8.39e-123 | 282 | 605 | 7 | 318 | Thestructure of endo-beta-1,4-galactanase from Bacillus licheniformis [Bacillus licheniformis],1R8L_B The structure of endo-beta-1,4-galactanase from Bacillus licheniformis [Bacillus licheniformis],1UR0_A The structure of endo-beta-1,4-galactanase from Bacillus licheniformis in complex with two oligosaccharide products. [Bacillus licheniformis],1UR0_B The structure of endo-beta-1,4-galactanase from Bacillus licheniformis in complex with two oligosaccharide products. [Bacillus licheniformis],1UR4_A The structure of endo-beta-1,4-galactanase from Bacillus licheniformis in complex with two oligosaccharide products. [Bacillus licheniformis],1UR4_B The structure of endo-beta-1,4-galactanase from Bacillus licheniformis in complex with two oligosaccharide products. [Bacillus licheniformis],2CCR_A Structure of Beta-1,4-Galactanase [Bacillus licheniformis],2CCR_B Structure of Beta-1,4-Galactanase [Bacillus licheniformis],2J74_A Structure of Beta-1,4-Galactanase [Bacillus licheniformis],2J74_B Structure of Beta-1,4-Galactanase [Bacillus licheniformis] |
2GFT_A | 6.67e-122 | 282 | 605 | 7 | 318 | ChainA, Glycosyl Hydrolase Family 53 [Bacillus licheniformis],2GFT_B Chain B, Glycosyl Hydrolase Family 53 [Bacillus licheniformis] |
7OSK_A | 2.90e-69 | 282 | 598 | 33 | 342 | ChainA, Arabinogalactan endo-1,4-beta-galactosidase [Ignisphaera aggregans DSM 17230],7OSK_B Chain B, Arabinogalactan endo-1,4-beta-galactosidase [Ignisphaera aggregans DSM 17230] |
4BF7_A | 3.65e-31 | 301 | 548 | 22 | 266 | Emericillanidulans endo-beta-1,4-galactanase [Aspergillus nidulans] |
1FHL_A | 2.25e-30 | 301 | 551 | 5 | 252 | CrystalStructure Of Beta-1,4-galactanase From Aspergillus Aculeatus At 293k [Aspergillus aculeatus],1FOB_A Crystal Structure Of Beta-1,4-galactanase From Aspergillus Aculeatus At 100k [Aspergillus aculeatus],6Q3R_A ASPERGILLUS ACULEATUS GALACTANASE [Aspergillus aculeatus],6Q3R_B ASPERGILLUS ACULEATUS GALACTANASE [Aspergillus aculeatus] |
Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
---|---|---|---|---|---|---|
Q65CX5 | 7.38e-122 | 272 | 605 | 25 | 343 | Endo-beta-1,4-galactanase OS=Bacillus licheniformis (strain ATCC 14580 / DSM 13 / JCM 2505 / CCUG 7422 / NBRC 12200 / NCIMB 9375 / NCTC 10341 / NRRL NRS-1264 / Gibson 46) OX=279010 GN=ganB PE=1 SV=1 |
O07013 | 3.84e-117 | 284 | 605 | 38 | 347 | Endo-beta-1,4-galactanase OS=Bacillus subtilis (strain 168) OX=224308 GN=ganB PE=1 SV=1 |
P48843 | 3.73e-39 | 299 | 597 | 6 | 297 | Uncharacterized protein in bgaB 5'region (Fragment) OS=Niallia circulans OX=1397 PE=3 SV=1 |
P48841 | 3.18e-35 | 294 | 562 | 20 | 287 | Arabinogalactan endo-beta-1,4-galactanase OS=Cellvibrio japonicus (strain Ueda107) OX=498211 GN=ganB PE=1 SV=1 |
Q8X168 | 9.85e-33 | 301 | 554 | 21 | 271 | Arabinogalactan endo-beta-1,4-galactanase A OS=Aspergillus niger OX=5061 GN=galA PE=1 SV=1 |
Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
---|---|---|---|---|---|
0.000264 | 0.999005 | 0.000222 | 0.000175 | 0.000166 | 0.000144 |
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