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CAZyme Information: MGYG000000245_03253
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Roseburia sp003470905 | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; Roseburia; Roseburia sp003470905 | |||||||||||
| CAZyme ID | MGYG000000245_03253 | |||||||||||
| CAZy Family | CE8 | |||||||||||
| CAZyme Description | Pectinesterase A | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 18282; End: 19316 Strand: - | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| CE8 | 10 | 333 | 1.5e-84 | 0.9548611111111112 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| COG4677 | PemB | 3.71e-71 | 12 | 305 | 92 | 377 | Pectin methylesterase and related acyl-CoA thioesterases [Carbohydrate transport and metabolism, Lipid transport and metabolism]. |
| PLN02432 | PLN02432 | 2.75e-47 | 14 | 339 | 23 | 291 | putative pectinesterase |
| pfam01095 | Pectinesterase | 8.27e-47 | 14 | 300 | 12 | 259 | Pectinesterase. |
| PLN02773 | PLN02773 | 1.08e-46 | 13 | 330 | 16 | 290 | pectinesterase |
| PLN02682 | PLN02682 | 1.54e-44 | 5 | 330 | 71 | 355 | pectinesterase family protein |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| CBL11054.1 | 4.85e-222 | 1 | 344 | 1 | 368 |
| VCV23720.1 | 6.89e-222 | 1 | 344 | 1 | 368 |
| CBL08524.1 | 6.89e-222 | 1 | 344 | 1 | 368 |
| AEN98064.1 | 9.62e-141 | 14 | 341 | 16 | 332 |
| SET76962.1 | 8.89e-112 | 4 | 341 | 1 | 321 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 2NSP_A | 7.70e-36 | 8 | 341 | 12 | 339 | ChainA, Pectinesterase A [Dickeya dadantii 3937],2NSP_B Chain B, Pectinesterase A [Dickeya dadantii 3937],2NST_A Chain A, Pectinesterase A [Dickeya dadantii 3937],2NST_B Chain B, Pectinesterase A [Dickeya dadantii 3937],2NT6_A Chain A, Pectinesterase A [Dickeya dadantii 3937],2NT6_B Chain B, Pectinesterase A [Dickeya dadantii 3937],2NT9_A Chain A, Pectinesterase A [Dickeya dadantii 3937],2NT9_B Chain B, Pectinesterase A [Dickeya dadantii 3937] |
| 1QJV_A | 1.55e-30 | 8 | 341 | 12 | 339 | ChainA, PECTIN METHYLESTERASE [Dickeya chrysanthemi],1QJV_B Chain B, PECTIN METHYLESTERASE [Dickeya chrysanthemi] |
| 2NTB_A | 1.55e-30 | 8 | 341 | 12 | 339 | Crystalstructure of pectin methylesterase in complex with hexasaccharide V [Dickeya dadantii 3937],2NTB_B Crystal structure of pectin methylesterase in complex with hexasaccharide V [Dickeya dadantii 3937],2NTP_A Crystal structure of pectin methylesterase in complex with hexasaccharide VI [Dickeya dadantii 3937],2NTP_B Crystal structure of pectin methylesterase in complex with hexasaccharide VI [Dickeya dadantii 3937],2NTQ_A Crystal structure of pectin methylesterase in complex with hexasaccharide VII [Dickeya dadantii 3937],2NTQ_B Crystal structure of pectin methylesterase in complex with hexasaccharide VII [Dickeya dadantii 3937] |
| 3UW0_A | 1.54e-28 | 7 | 340 | 35 | 362 | Pectinmethylesterase from Yersinia enterocolitica [Yersinia enterocolitica subsp. enterocolitica 8081] |
| 1XG2_A | 6.45e-26 | 14 | 300 | 15 | 262 | ChainA, Pectinesterase 1 [Solanum lycopersicum] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| Q9LVQ0 | 1.23e-36 | 14 | 330 | 17 | 290 | Pectinesterase 31 OS=Arabidopsis thaliana OX=3702 GN=PME31 PE=1 SV=1 |
| Q9FM79 | 1.70e-34 | 16 | 300 | 94 | 339 | Pectinesterase QRT1 OS=Arabidopsis thaliana OX=3702 GN=QRT1 PE=1 SV=1 |
| Q9LY18 | 6.22e-34 | 14 | 337 | 77 | 347 | Probable pectinesterase 49 OS=Arabidopsis thaliana OX=3702 GN=PME49 PE=2 SV=1 |
| Q9LY17 | 1.66e-30 | 13 | 337 | 76 | 347 | Probable pectinesterase 50 OS=Arabidopsis thaliana OX=3702 GN=PME50 PE=2 SV=1 |
| Q9SIJ9 | 3.79e-30 | 9 | 339 | 56 | 331 | Putative pectinesterase 11 OS=Arabidopsis thaliana OX=3702 GN=PME11 PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 1.000068 | 0.000000 | 0.000000 | 0.000000 | 0.000000 | 0.000000 |