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CAZyme Information: MGYG000000247_00681

You are here: Home > Sequence: MGYG000000247_00681

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Collinsella intestinalis
Lineage Bacteria; Actinobacteriota; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; Collinsella intestinalis
CAZyme ID MGYG000000247_00681
CAZy Family CBM48
CAZyme Description 1,4-alpha-glucan branching enzyme GlgB
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
719 81518.42 5.2511
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000247 1726497 Isolate China Asia
Gene Location Start: 802059;  End: 804218  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

EC 2.4.1.18

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH13 228 523 2.1e-135 0.9933554817275747
CBM48 51 133 4.8e-16 0.8552631578947368

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
PRK05402 PRK05402 0.0 31 678 99 726
1,4-alpha-glucan branching protein GlgB.
PRK14705 PRK14705 0.0 36 640 607 1187
glycogen branching enzyme; Provisional
PRK12313 PRK12313 0.0 32 677 7 629
1,4-alpha-glucan branching protein GlgB.
PRK12568 PRK12568 0.0 40 671 115 724
glycogen branching enzyme; Provisional
COG0296 GlgB 0.0 32 675 6 628
1,4-alpha-glucan branching enzyme [Carbohydrate transport and metabolism].

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QIA34706.1 0.0 32 711 29 709
ATP53564.1 0.0 9 686 5 685
AZH69616.1 0.0 9 693 5 697
AEB07177.1 0.0 30 675 26 670
QOY61640.1 0.0 25 672 49 696

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
5GQZ_A 3.91e-202 22 672 121 770
Crystalstructure of branching enzyme Y500A mutant from Cyanothece sp. ATCC 51142 [Crocosphaera subtropica ATCC 51142]
5GQU_A 5.54e-202 22 672 121 770
Crystalstructure of branching enzyme from Cyanothece sp. ATCC 51142 [Crocosphaera subtropica ATCC 51142],5GQV_A Crystal structure of branching enzyme from Cyanothece sp. ATCC 51142 in complex with maltohexaose [Crocosphaera subtropica ATCC 51142],5GQY_A Crystal structure of branching enzyme from Cyanothece sp. ATCC 51142 in complex with maltoheptaose [Crocosphaera subtropica ATCC 51142]
5GR2_A 1.57e-201 22 672 121 770
Crystalstructure of branching enzyme L541A mutant from Cyanothece sp. ATCC 51142 [Crocosphaera subtropica ATCC 51142],5GR4_A Crystal structure of branching enzyme L541A mutant from Cyanothece sp. ATCC 51142 in complex with maltoheptaose [Crocosphaera subtropica ATCC 51142]
5GQW_A 2.21e-201 22 672 121 770
Crystalstructure of branching enzyme W610N mutant from Cyanothece sp. ATCC 51142 [Crocosphaera subtropica ATCC 51142],5GQX_A Crystal structure of branching enzyme W610N mutant from Cyanothece sp. ATCC 51142 in complex with maltoheptaose [Crocosphaera subtropica ATCC 51142]
5GR5_A 2.21e-201 22 672 121 770
Crystalstructure of branching enzyme W610A mutant from Cyanothece sp. ATCC 51142 [Crocosphaera subtropica ATCC 51142]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
B8CVY1 8.30e-224 31 674 5 626
1,4-alpha-glucan branching enzyme GlgB OS=Halothermothrix orenii (strain H 168 / OCM 544 / DSM 9562) OX=373903 GN=glgB PE=3 SV=1
Q24VW3 9.39e-221 31 672 11 626
1,4-alpha-glucan branching enzyme GlgB OS=Desulfitobacterium hafniense (strain Y51) OX=138119 GN=glgB PE=3 SV=1
Q8DLB8 6.68e-210 32 672 106 747
1,4-alpha-glucan branching enzyme GlgB OS=Thermosynechococcus vestitus (strain IAM M-273 / NIES-2133 / BP-1) OX=197221 GN=glgB PE=3 SV=1
B7HBC7 5.78e-207 40 666 14 609
1,4-alpha-glucan branching enzyme GlgB OS=Bacillus cereus (strain B4264) OX=405532 GN=glgB PE=3 SV=1
Q5N4W5 1.78e-206 11 672 96 756
1,4-alpha-glucan branching enzyme GlgB OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) OX=269084 GN=glgB PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.999684 0.000260 0.000030 0.000003 0.000001 0.000035

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000000247_00681.