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CAZyme Information: MGYG000000251_02924

You are here: Home > Sequence: MGYG000000251_02924

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Fusicatenibacter saccharivorans
Lineage Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; Fusicatenibacter; Fusicatenibacter saccharivorans
CAZyme ID MGYG000000251_02924
CAZy Family GH120
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
662 MGYG000000251_17|CGC2 75117.16 5.0598
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000251 3784614 Isolate China Asia
Gene Location Start: 28381;  End: 30369  Strand: -

Full Sequence      Download help

MIYYVNNSAP  KNGNGTKEMP  FKFINDAAKI  AKAGDEVLVA  PGIYHEYVDP  VNGGTEDARI60
VYKSEKPLGA  KITGAETMND  WEHYKDNVWV  CRVDNGVFGN  YNPYTTMVGG  DWYFAPVVRH120
TGAVYLNDRQ  LYEAETLEEC  IKGEVYAPSW  EPEWSVYKWY  TEQDKEKNQT  VIYANFQGKN180
PTEEKVEINV  RRNCFMPSKT  GVNYITFSGF  DVSKAATTWA  PPAAYQDGMI  GPHWSKGWII240
EDCEVSNSKC  CGISLGKYYD  PENDHYFTRK  HVKSPTQMER  DAVCRGQYHG  WTKENIGSHI300
IRRCHIHHCE  QTGIVGRMGG  VFSIIEDNHI  HNINNMQQLG  GAEISGIKMH  AAIDVVMRRN360
HIHHCTMGIW  CDWEAQGTRL  TQNLLHDNCP  PEGTPKAEGA  MMSQDIFIEV  GHGPTLIDNN420
IMLSPVSVRM  ATDGIACVHN  LMLGSLTAVG  GGTGDRYTPY  HIRHRTEVAG  FMTFLHGDDR480
FYNNIFIQNY  PVEETETVED  MGFKMEDNQE  VGTHVFDEYP  TYDEWISHFE  LDKPADMSKL540
EPYHNKCHLP  VWVNGNAYFN  GAKACVNEKE  NLMDNENQVK  VELVEKDGHY  SIKTNVYEFL600
KDFRTGIINS  DILGYAFEPE  QRFEDPDGST  IIFDQDYLGE  HRGVAAMPGP  FADGAEAEKI660
LW662

Enzyme Prediction      help

No EC number prediction in MGYG000000251_02924.

CAZyme Signature Domains help

Created with Snap336699132165198231264297331364397430463496529562595628298388GH120
Family Start End Evalue family coverage
GH120 298 388 3.4e-34 0.989010989010989

CDD Domains      download full data without filtering help

Created with Snap336699132165198231264297331364397430463496529562595628294389Beta_helix2775PL-6294389Beta_helix646DUF1565
Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam13229 Beta_helix 1.52e-07 294 389 52 138
Right handed beta helix region. This region contains a parallel beta helix region that shares some similarity with Pectate lyases.
cd14251 PL-6 0.001 27 75 10 59
Polysaccharide Lyase Family 6. Polysaccharide Lyase Family 6 is a family of beta-helical polysaccharide lyases. Members include alginate lyase (EC 4.2.2.3) and chondroitinase B (EC 4.2.2.19). Chondroitinase B is an enzyme that only cleaves the beta-(1,4)-linkage of dermatan sulfate (DS), leading to 4,5-unsaturated dermatan sulfate disaccharides as the product. DS is a highly sulfated, unbranched polysaccharide belonging to a family of glycosaminoglycans (GAGs) composed of alternating hexosamine (gluco- or galactosamine) and uronic acid (D-glucuronic or L-iduronic acid) moieties. DS contains alternating 1,4-beta-D-galactosamine (GalNac) and 1,3-alpha-L-iduronic acid units. The related chondroitin sulfate (CS) contains alternating GalNac and 1,3-beta-D-glucuronic acid units. Alginate lyases (known as either mannuronate (EC 4.2.2.3) or guluronate lyases (EC 4.2.2.11) catalyze the degradation of alginate, a copolymer of alpha-L-guluronate and its C5 epimer beta-D-mannuronate.
pfam13229 Beta_helix 0.001 294 389 6 91
Right handed beta helix region. This region contains a parallel beta helix region that shares some similarity with Pectate lyases.
pfam07602 DUF1565 0.004 6 46 4 40
Protein of unknown function (DUF1565). These proteins share a region of homology in their N termini, and are found in several phylogenetically diverse bacteria and in the archaeon Methanosarcina acetivorans. Some of these proteins also contain characterized domains such as pfam00395 and pfam03422.

CAZyme Hits      help

Created with Snap3366991321651982312642973313643974304634965295625956281660CDZ23985.1|GH1201660CUH92906.1|GH1201652AEE97234.1|GH1201661QAY33347.1|GH1201662QFR62202.1|GH120
Hit ID E-Value Query Start Query End Hit Start Hit End
CDZ23985.1 0.0 1 660 1 662
CUH92906.1 0.0 1 660 1 665
AEE97234.1 0.0 1 652 1 654
QAY33347.1 0.0 1 661 1 661
QFR62202.1 0.0 1 662 1 675

PDB Hits      download full data without filtering help

Created with Snap33669913216519823126429733136439743046349652956259562816523VST_A
Hit ID E-Value Query Start Query End Hit Start Hit End Description
3VST_A 4.41e-156 1 652 1 626
Thecomplex structure of XylC with Tris [Thermoanaerobacterium saccharolyticum JW/SL-YS485],3VST_B The complex structure of XylC with Tris [Thermoanaerobacterium saccharolyticum JW/SL-YS485],3VST_C The complex structure of XylC with Tris [Thermoanaerobacterium saccharolyticum JW/SL-YS485],3VST_D The complex structure of XylC with Tris [Thermoanaerobacterium saccharolyticum JW/SL-YS485],3VSU_A The complex structure of XylC with xylobiose [Thermoanaerobacterium saccharolyticum JW/SL-YS485],3VSU_B The complex structure of XylC with xylobiose [Thermoanaerobacterium saccharolyticum JW/SL-YS485],3VSU_C The complex structure of XylC with xylobiose [Thermoanaerobacterium saccharolyticum JW/SL-YS485],3VSU_D The complex structure of XylC with xylobiose [Thermoanaerobacterium saccharolyticum JW/SL-YS485],3VSV_A The complex structure of XylC with xylose [Thermoanaerobacterium saccharolyticum JW/SL-YS485],3VSV_B The complex structure of XylC with xylose [Thermoanaerobacterium saccharolyticum JW/SL-YS485],3VSV_C The complex structure of XylC with xylose [Thermoanaerobacterium saccharolyticum JW/SL-YS485],3VSV_D The complex structure of XylC with xylose [Thermoanaerobacterium saccharolyticum JW/SL-YS485]

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000044 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000000251_02924.