CAZyme Information: MGYG000000265_01415

Basic Information

• Species: Bacteroides nordii
• Lineage: Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; Bacteroides nordii
• CAZyme ID: MGYG000000265_01415
• CAZy Family: GH127
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
676	MGYG000000265_4|CGC5	77552.21	5.5408

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000000265	5489209	Isolate	China	Asia

• Gene Location: Start: 185611; End: 187641 Strand: -

Full Sequence      

MKNNGKLVIALTGLFGLLGCVQPLLKDNDIIELKYVPVPISDIQPEGWLKNQLDIMCDGS
SGHLDEIYDKVKNDNAWLGGKGDAWEETPYWLDGAVPLAYLTKDKGLIAKVEKYINWSLD
NQRPSGYFGPITTYERESGKLITTQIADKGEDWWPRMIMLKVMQQYYSATHDERVITFMS
KYFQYQEEALKNISIGHWSEWSQARGIENINMILWLYRITRKNELLCLADRIRKQSFQWT
EWFEKRDWVMGAAANQNGENWMERHSVNVAMAMKSPAIDYLRTGNTAFLAIQDRCFKDLM
LLHGLPNGCISGDEDIHGNEPSQGTELCTIVESMYSLENIIAITGKNSYMDALERIAFNA
LPAQTTDDYNYKQYFQIPNQPQACLGSFDFSLTAYQGTSNVYGTASGYTCCYANMHQGWT
KFTSSLWYSTPDEGIAALIYAPSRIITKLRDANLSIWEETNYPFEENIRFHFTLDKETVF
PFHLRIPSWCEKAQIYINGQKGEVDGKDSLIVVNRKWKNGDVLELRLPMSIFISNWARNS
HTVERGPLIYGLKIKERWEEGHSDIQGNYWSVFPESKWNYALHECVINDPATHIKVSYLD
PVDSLFVWNQAHAPIELVAPAKQLPWWKSGESGVLKQPVTDREGYYKGLVGNNEEQICLI
PYGCTKIRIVAFPVVR

Enzyme Prediction     

No EC number prediction in MGYG000000265_01415.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH127	91	550	3.3e-34	0.8835877862595419

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
pfam07944	Glyco_hydro_127	1.34e-50	90	550	62	502	Beta-L-arabinofuranosidase, GH127. One member of this family, from Bidobacterium longicum, UniProtKB:E8MGH8, has been characterized as an unusual beta-L-arabinofuranosidase enzyme, EC:3.2.1.185. It rleases l-arabinose from the l-arabinofuranose (Araf)-beta1,2-Araf disaccharide and also transglycosylates 1-alkanols with retention of the anomeric configuration. Terminal beta-l-arabinofuranosyl residues have been found in arabinogalactan proteins from a mumber of different plantt species. beta-l-Arabinofuranosyl linkages with 1-4 arabinofuranosides are also found in the sugar chains of extensin and solanaceous lectins, hydroxyproline (Hyp)2-rich glycoproteins that are widely observed in plant cell wall fractions. The critical residue for catalytic activity is Glu-338, in a ET/SCAS sequence context.
COG3533	COG3533	5.09e-23	326	550	292	500	Uncharacterized conserved protein, DUF1680 family [Function unknown].

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
QJE95537.1	2.02e-128	35	675	40	648
QXU43103.1	7.51e-127	35	675	37	647
AOM80627.1	1.03e-126	35	675	34	645
QNN43859.1	6.07e-126	35	675	38	649
QPH39723.1	6.07e-126	35	675	38	649

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
5MQO_A	4.21e-16	326	553	381	609	Glycosidehydrolase BT_1003 [Bacteroides thetaiotaomicron]
4QJY_A	4.03e-13	91	553	82	562	Crystalstructure of native Ara127N, a GH127 beta-L-arabinofuranosidase from Geobacillus Stearothermophilus T6 [Geobacillus stearothermophilus],4QJY_B Crystal structure of native Ara127N, a GH127 beta-L-arabinofuranosidase from Geobacillus Stearothermophilus T6 [Geobacillus stearothermophilus]
6EX6_A	2.80e-12	326	577	315	567	TheGH127, Beta-arabinofuranosidase, BT3674 [Bacteroides thetaiotaomicron VPI-5482],6EX6_B The GH127, Beta-arabinofuranosidase, BT3674 [Bacteroides thetaiotaomicron VPI-5482]
4QK0_A	4.45e-11	326	553	333	562	Crystalstructure of Ara127N-Se, a GH127 beta-L-arabinofuranosidase from Geobacillus Stearothermophilus T6 [Geobacillus stearothermophilus],4QK0_B Crystal structure of Ara127N-Se, a GH127 beta-L-arabinofuranosidase from Geobacillus Stearothermophilus T6 [Geobacillus stearothermophilus],4QK0_C Crystal structure of Ara127N-Se, a GH127 beta-L-arabinofuranosidase from Geobacillus Stearothermophilus T6 [Geobacillus stearothermophilus],4QK0_D Crystal structure of Ara127N-Se, a GH127 beta-L-arabinofuranosidase from Geobacillus Stearothermophilus T6 [Geobacillus stearothermophilus]

Swiss-Prot Hits     

has no Swissprot hit.

SignalP and Lipop Annotations

This protein is predicted as LIPO

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.000000	0.000002	1.000046	0.000000	0.000000	0.000000

TMHMM  Annotations     

start	end
7	25