CAZyme Information: MGYG000000265_01928

Basic Information

• Species: Bacteroides nordii
• Lineage: Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; Bacteroides nordii
• CAZyme ID: MGYG000000265_01928
• CAZy Family: PL35
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
605	MGYG000000265_6|CGC1	69404.89	6.8153

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000000265	5489209	Isolate	China	Asia

• Gene Location: Start: 50254; End: 52071 Strand: -

Full Sequence      

MRTIFLLIFFLLFQGELNMYAQVLPSHPRILMSGGEEIEIKEALSMDTLWTGLHRNFLKE
CNNLLNRPLLERKKVGMRLLATSREALRRILFLSYAYRITGDEIYFQRAEEELLTVCRFS
DWNPSHFLDVAEMVLGVAIGFDWLYTKLSADSRRIISEAIMTKGLLPAQDERYNWYLKAN
HNWNQVCNAGIAIAALAVYEQNPEMCRSLIRQAVESVKLPMAEYAPDGAYPEGYSYWRYG
TTFNVLLLGTLEKVGDWDLLPALSSGFMNTPYYYEQMVGPTGYSFNYADCGDEHGLAPVM
FWFAKKTGDLSLLWTEKSFMQKDKCSGYLANRLFPLIFLWGRNIEIDKIVPPEKMMWIGG
GITPVALMRTSWTDKNALYVGIKGGTSSSNHSHMDAGSFVMDAMGIRWAMDLGMQNYESL
ESKKMQIWSNDQHSERWKVFRYNNYAHNTLTINNKLHDVKGYACWKSFIDSESLKSATID
LTTIFKDELLFCQREIAMVNGTYVVVRDSVKTDATKQALLRWTMLTRTQVREIQKDGFIL
EQDGKRMNVKIKSRNQVQIKRWSAQSGNSYDAPNPNVVLIGFEAIIPAGEEAVFETVLCP
EQLVY

Enzyme Prediction     

No EC number prediction in MGYG000000265_01928.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
PL35	376	555	1.2e-63	0.9832402234636871

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
pfam07940	Hepar_II_III	2.22e-08	380	524	28	164	Heparinase II/III-like protein. This family features sequences that are similar to a region of the Flavobacterium heparinum proteins heparinase II and heparinase III. The former is known to degrade heparin and heparin sulphate, whereas the latter predominantly degrades heparin sulphate. Both are secreted into the periplasmic space upon induction with heparin.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
BCI63358.1	6.11e-239	4	605	3	604
BCI62057.1	9.69e-233	14	605	22	613
QMW02098.1	5.27e-211	4	604	12	610
AHM59630.1	8.49e-208	21	601	30	610
QHT65845.1	4.49e-206	1	601	1	610

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
3A0O_A	7.48e-06	15	435	127	573	Crystalstructure of alginate lyase from Agrobacterium tumefaciens C58 [Agrobacterium fabrum str. C58],3A0O_B Crystal structure of alginate lyase from Agrobacterium tumefaciens C58 [Agrobacterium fabrum str. C58]
3AFL_A	9.84e-06	15	259	127	388	Crystalstructure of exotype alginate lyase Atu3025 H531A complexed with alginate trisaccharide [Agrobacterium fabrum str. C58]

Swiss-Prot Hits     

has no Swissprot hit.

SignalP and Lipop Annotations

This protein is predicted as SP

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.000203	0.999229	0.000141	0.000150	0.000130	0.000131

TMHMM  Annotations     

There is no transmembrane helices in MGYG000000265_01928.