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CAZyme Information: MGYG000000265_03635
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Bacteroides nordii | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; Bacteroides nordii | |||||||||||
| CAZyme ID | MGYG000000265_03635 | |||||||||||
| CAZy Family | PL13 | |||||||||||
| CAZyme Description | Heparin lyase I | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 33784; End: 34953 Strand: + | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| PL13 | 21 | 388 | 1.2e-202 | 0.9889807162534435 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| pfam14099 | Polysacc_lyase | 4.40e-17 | 49 | 377 | 9 | 201 | Polysaccharide lyase. This family includes heparin lyase I, EC:4.2.2.7. Heparin lyase I depolymerizes heparin by cleaving the glycosidic linkage next to an iduronic acid moiety. The structure of heparin lyase I consists of a beta-jelly roll domain with a long, deep substrate-binding groove and an unusual thumb domain containing many basic residues extending from the main body of the enzyme. This family also includes glucuronan lyase, EC:4.2.2.14. The structure glucuronan lyase is a beta-jelly roll. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| QUT42654.1 | 1.13e-233 | 1 | 388 | 1 | 391 |
| AAO79780.1 | 3.62e-233 | 17 | 388 | 1 | 375 |
| QMW89253.1 | 3.62e-233 | 17 | 388 | 1 | 375 |
| BCA49303.1 | 4.61e-233 | 1 | 388 | 1 | 391 |
| ALJ42854.1 | 4.61e-233 | 1 | 388 | 1 | 391 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 3IKW_A | 4.99e-234 | 19 | 388 | 4 | 373 | Structureof Heparinase I from Bacteroides thetaiotaomicron [Bacteroides thetaiotaomicron] |
| 3ILR_A | 8.68e-234 | 25 | 388 | 6 | 369 | Structureof Heparinase I from Bacteroides thetaiotaomicron in complex with tetrasaccharide product [Bacteroides thetaiotaomicron] |
| 3IMN_A | 1.17e-233 | 17 | 388 | 1 | 375 | Crystalstructure of heparin lyase I from Bacteroides thetaiotaomicron [Bacteroides thetaiotaomicron],3IN9_A Crystal structure of heparin lyase I complexed with disaccharide heparin [Bacteroides thetaiotaomicron] |
| 3INA_A | 3.90e-232 | 17 | 388 | 1 | 375 | Crystalstructure of heparin lyase I H151A mutant complexed with a dodecasaccharide heparin [Bacteroides thetaiotaomicron] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| Q05819 | 2.21e-188 | 20 | 388 | 21 | 381 | Heparin lyase I OS=Pedobacter heparinus OX=984 PE=1 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.000606 | 0.998556 | 0.000326 | 0.000175 | 0.000157 | 0.000157 |