CAZyme Information: MGYG000000265_03881

Basic Information

• Species: Bacteroides nordii
• Lineage: Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; Bacteroides nordii
• CAZyme ID: MGYG000000265_03881
• CAZy Family: PL15
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
866		98878.5	6.7722

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000000265	5489209	Isolate	China	Asia

• Gene Location: Start: 31424; End: 34024 Strand: -

Full Sequence      

MALFFSGSLLGQEQSSYIHYLTSKEHLVTIHLSDAMLMHEMRETPSPLNNAVVGERAVSL
MWPLAGDNQIHGSGLDGMETPKISKSSQMYRVRLSQDRNFKDNVIEAVCSWPFYNPEIPL
ADGVWYWQYGYVEGGSTSWSEVLKFTQEPHQDRFSPPSFKTFISKLPSRHPRVLVASDEW
DTFISQSEDAPERAWYIARAEKILKVPMKHIDDTDTSKMAGLDNEVKRNALLTRESRRIV
DKEEVNAEVFVRAYLLTKDDRYYKEAMKRILEMIKWEESPNFVGDFNESALLSLCSMAYD
AFYDKLDASQKRLLLKEVQKNGTKFFNRFNNHLENHIADNHVWQMAFRIFTMATFSVYGD
LPEAEVWADYCYNLWVARFPGLNQDGAWHNGDSYFHVNIRTLIEVPYFYSRISGYDFFSD
PWYEGSAMYVIYQQPPFSKSAGNGSSHQNVLQPNGGRVGYADALARLINNTYSADYVRCI
LQKEPDLLRKAFMAKTGDLSWFRLQNHTPLPEGRKMKDLPLAYVFPQTGVATLMSDWENF
SRNAMLTFRSSPYGSTSHAIANQNAFNTFFDGKPLFYSSGHHISFTDEHSVYCHRSTRAH
NSILVNGMGQRIGTEGYGWIPRYYTGKRISYFVGDASNAYGEVISPLWLARGRDSGLEYS
PANGWDKNRLKTFRRHIVELGNAGLIFIYDELEADTAVTWSYLLHTIEHPMIIKNDKGVM
HITATNAGGVSDAYLFANDKLETKQTDQFFYPAVNWLRADDKGYFAPYKNHWHFTATSPH
SPVYRFATVVSTHGQGSAGVVPEKISKDTLKAGGWIIKMNISPKGKATFTIENKAENIVL
EYDGSTKITEEGRTVILKDQVPELEI

Enzyme Prediction     

No EC number prediction in MGYG000000265_03881.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
PL15	540	692	2.9e-87	0.9743589743589743

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
pfam16332	DUF4962	0.0	37	507	3	475	Domain of unknown function (DUF4962). This family consists of uncharacterized proteins around 870 residues in length and is mainly found in various Bacteroides species. The function of this protein is unknown.
pfam07940	Hepar_II_III	5.99e-08	525	705	9	165	Heparinase II/III-like protein. This family features sequences that are similar to a region of the Flavobacterium heparinum proteins heparinase II and heparinase III. The former is known to degrade heparin and heparin sulphate, whereas the latter predominantly degrades heparin sulphate. Both are secreted into the periplasmic space upon induction with heparin.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
QIU94210.1	0.0	21	866	18	867
QUT44203.1	0.0	29	866	26	876
QUR44694.1	0.0	21	866	18	867
QUT78348.1	0.0	21	866	18	867
QRQ49816.1	0.0	28	866	25	876

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
6LJA_A	3.51e-306	23	866	19	868	ChainA, Heparinase II/III-like protein [Bacteroides intestinalis DSM 17393]
6LJL_A	2.63e-303	23	866	19	868	ChainA, Heparinase II/III-like protein [Bacteroides intestinalis DSM 17393]
3A0O_A	8.21e-36	90	647	53	625	Crystalstructure of alginate lyase from Agrobacterium tumefaciens C58 [Agrobacterium fabrum str. C58],3A0O_B Crystal structure of alginate lyase from Agrobacterium tumefaciens C58 [Agrobacterium fabrum str. C58]
3AFL_A	1.39e-34	90	647	53	625	Crystalstructure of exotype alginate lyase Atu3025 H531A complexed with alginate trisaccharide [Agrobacterium fabrum str. C58]

Swiss-Prot Hits     

has no Swissprot hit.

SignalP and Lipop Annotations

This protein is predicted as OTHER

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.874710	0.124364	0.000428	0.000209	0.000107	0.000196

TMHMM  Annotations     

There is no transmembrane helices in MGYG000000265_03881.