Species | Schaedlerella sp900066545 | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|
Lineage | Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; Schaedlerella; Schaedlerella sp900066545 | |||||||||||
CAZyme ID | MGYG000000268_02663 | |||||||||||
CAZy Family | GH39 | |||||||||||
CAZyme Description | HTH-type transcriptional activator RhaS | |||||||||||
CAZyme Property |
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Genome Property |
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Gene Location | Start: 36406; End: 38775 Strand: + |
Family | Start | End | Evalue | family coverage |
---|---|---|---|---|
GH39 | 301 | 739 | 1.8e-55 | 0.974477958236659 |
Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
---|---|---|---|---|---|---|---|
COG2207 | AraC | 1.02e-31 | 154 | 258 | 21 | 125 | AraC-type DNA-binding domain and AraC-containing proteins [Transcription]. |
smart00342 | HTH_ARAC | 7.66e-30 | 170 | 252 | 2 | 84 | helix_turn_helix, arabinose operon control protein. |
pfam01229 | Glyco_hydro_39 | 1.15e-27 | 329 | 762 | 42 | 461 | Glycosyl hydrolases family 39. |
pfam12833 | HTH_18 | 4.92e-25 | 175 | 254 | 1 | 81 | Helix-turn-helix domain. |
COG3664 | XynB | 1.72e-23 | 317 | 788 | 1 | 424 | Beta-xylosidase [Carbohydrate transport and metabolism]. |
Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
---|---|---|---|---|---|
AGF58080.1 | 2.55e-138 | 13 | 788 | 20 | 798 |
AQR96769.1 | 8.33e-136 | 13 | 788 | 20 | 798 |
QQQ92191.1 | 2.02e-131 | 6 | 788 | 9 | 796 |
QJU15301.1 | 2.02e-131 | 6 | 788 | 9 | 796 |
ASU27451.1 | 2.24e-131 | 6 | 788 | 13 | 800 |
Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
---|---|---|---|---|---|---|
4M29_A | 1.49e-30 | 317 | 788 | 38 | 496 | Structureof a GH39 Beta-xylosidase from Caulobacter crescentus [Caulobacter vibrioides CB15] |
4EKJ_A | 2.00e-30 | 317 | 788 | 38 | 496 | ChainA, Beta-xylosidase [Caulobacter vibrioides] |
6UQJ_A | 3.21e-27 | 317 | 786 | 43 | 501 | Crystalstructure of the GH39 enzyme from Xanthomonas axonopodis pv. citri [Xanthomonas citri pv. citri str. 306] |
2BS9_A | 5.66e-24 | 306 | 788 | 19 | 480 | Nativecrystal structure of a GH39 beta-xylosidase XynB1 from Geobacillus stearothermophilus [Geobacillus stearothermophilus],2BS9_B Native crystal structure of a GH39 beta-xylosidase XynB1 from Geobacillus stearothermophilus [Geobacillus stearothermophilus],2BS9_C Native crystal structure of a GH39 beta-xylosidase XynB1 from Geobacillus stearothermophilus [Geobacillus stearothermophilus],2BS9_D Native crystal structure of a GH39 beta-xylosidase XynB1 from Geobacillus stearothermophilus [Geobacillus stearothermophilus],2BS9_E Native crystal structure of a GH39 beta-xylosidase XynB1 from Geobacillus stearothermophilus [Geobacillus stearothermophilus],2BS9_F Native crystal structure of a GH39 beta-xylosidase XynB1 from Geobacillus stearothermophilus [Geobacillus stearothermophilus],2BS9_G Native crystal structure of a GH39 beta-xylosidase XynB1 from Geobacillus stearothermophilus [Geobacillus stearothermophilus],2BS9_H Native crystal structure of a GH39 beta-xylosidase XynB1 from Geobacillus stearothermophilus [Geobacillus stearothermophilus] |
1W91_A | 1.79e-23 | 306 | 788 | 19 | 480 | crystalstructure of 1,4-BETA-D-XYLAN XYLOHYDROLASE solve using anomalous signal from Seleniomethionine [synthetic construct],1W91_B crystal structure of 1,4-BETA-D-XYLAN XYLOHYDROLASE solve using anomalous signal from Seleniomethionine [synthetic construct],1W91_C crystal structure of 1,4-BETA-D-XYLAN XYLOHYDROLASE solve using anomalous signal from Seleniomethionine [synthetic construct],1W91_D crystal structure of 1,4-BETA-D-XYLAN XYLOHYDROLASE solve using anomalous signal from Seleniomethionine [synthetic construct],1W91_E crystal structure of 1,4-BETA-D-XYLAN XYLOHYDROLASE solve using anomalous signal from Seleniomethionine [synthetic construct],1W91_F crystal structure of 1,4-BETA-D-XYLAN XYLOHYDROLASE solve using anomalous signal from Seleniomethionine [synthetic construct],1W91_G crystal structure of 1,4-BETA-D-XYLAN XYLOHYDROLASE solve using anomalous signal from Seleniomethionine [synthetic construct],1W91_H crystal structure of 1,4-BETA-D-XYLAN XYLOHYDROLASE solve using anomalous signal from Seleniomethionine [synthetic construct] |
Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
---|---|---|---|---|---|---|
Q936F1 | 2.30e-24 | 26 | 788 | 27 | 739 | Uncharacterized HTH-type transcriptional regulator OS=Staphylococcus aureus OX=1280 PE=4 SV=2 |
Q6GKK1 | 3.04e-24 | 26 | 788 | 27 | 739 | Uncharacterized HTH-type transcriptional regulator SAR0107 OS=Staphylococcus aureus (strain MRSA252) OX=282458 GN=SAR0107 PE=4 SV=1 |
Q8NYT6 | 1.23e-23 | 26 | 762 | 27 | 714 | Uncharacterized HTH-type transcriptional regulator MW0077 OS=Staphylococcus aureus (strain MW2) OX=196620 GN=MW0077 PE=4 SV=1 |
Q6GD21 | 1.23e-23 | 26 | 762 | 27 | 714 | Uncharacterized HTH-type transcriptional regulator SAS0078 OS=Staphylococcus aureus (strain MSSA476) OX=282459 GN=SAS0078 PE=4 SV=1 |
Q5HJR8 | 1.23e-23 | 26 | 762 | 27 | 714 | Uncharacterized HTH-type transcriptional regulator SACOL0084 OS=Staphylococcus aureus (strain COL) OX=93062 GN=SACOL0084 PE=4 SV=2 |
Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
---|---|---|---|---|---|
1.000062 | 0.000000 | 0.000000 | 0.000000 | 0.000000 | 0.000000 |
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